Quercus lobata (valley oak): 115958533
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Entry
115958533 CDS
T07350
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115958533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115958533
Spliceosome [BR:
qlo03041
]
Common components
Common spliceosomal components
SR proteins
115958533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
115958533
NCBI-ProteinID:
XP_030932805
UniProt:
A0A7N2ME29
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All DBs
Position
8:complement(57482537..57486640)
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AA seq
308 aa
AA seq
DB search
MPRYDDRYGGSRLYVGRLSSRTRSRDLDDIFSRYGRVRDVDMKRDFAFVEFSDPRDAEDA
IYNLNNRDVDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCKNSPKKLRRGRSYSRSPSPRRGRSRSHSYSRDRSYSRSPLK
RERSLEQVDRRSRSPHDSRSPKRHRGSPPPSKGRRRSPTPDDRSPQKRGSPSPRDGRQAN
GSDYSGSPRGKSKSPIDDADGESPRGRSYRSLAEENGRSGSPSPIHRDNRSPVDDNDNHG
SPRGSEST
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtatgatgaccgctacggtggttcgcgtctctatgtcgggcgcttgtcttcg
cggacaaggtcacgcgatcttgacgatatttttagcagatatggaagagtacgcgatgtg
gatatgaagcgcgacttcgcctttgttgaatttagtgatcctcgagatgctgaagatgca
atatataatcttaataatcgggatgttgatgggagtcgcatcattgtagaatttgctaaa
ggggggccacgtggtcctggtggatctcgtgagtatcttgggagaggtcctcctccagga
tcaggacgctgttttaattgtggaattgatggtcattgggctcgtgattgcaaagctggg
gactggaagaataagtgttatcggtgtggggaacggggccacatagaaagaaattgtaag
aatagtcctaaaaaacttagacgtgggcggagctactcaaggtcaccaagtcctcgtcgt
ggcagaagtagaagtcatagttacagcagggaccgtagttatagtcgatctcccttgaag
agagaacgaagccttgaacaagttgatagaagatcaagaagcccccatgacagccgtagc
ccgaaacgacacaggggttcaccaccaccatctaaaggtaggaggcgtagtcctacacct
gatgataggagcccacaaaagagaggcagcccatcgccaagggatggcaggcaggccaat
gggtctgactacagtgggagccccaggggaaagagcaaaagtcctattgatgatgctgat
ggagaaagcccccggggtaggagctataggagtcttgctgaagaaaatggccgcagtggc
agccctagtcctatccatcgggacaacaggagccccgttgatgataacgacaatcatggt
tctccaagaggcagtgagtcaacttaa
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