Quercus lobata (valley oak): 115958561
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Entry
115958561 CDS
T07350
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115958561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115958561
Enzymes [BR:
qlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
115958561
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
90S particles
Other 90S particles
115958561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
115958561
NCBI-ProteinID:
XP_030932846
UniProt:
A0A7N2MDI3
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Position
8:complement(33651164..33656866)
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AA seq
271 aa
AA seq
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MVRTYAVKGKKRKNREERRDREQDAKRAITEKTSDGEEEGKEVVNELEGIPVAPTEQNNT
NKGRLIFILEKASLEVAKVGKSYQLLNSDDHAYFLKKNNRNPSDYRPDIVHQALLMILDS
QLNKSGMVQAVYVKTEKGVLFEVKPHARLPRTFKHFCGLMLQLLQKLSITAAGKREKLLR
VIKNPVSRYLPVNSRKIGLSFSSEKLVNINNYVSSAGTGDVDLVFVVGAMAHGKIDREDA
DDFISISGYPLSAAYCIGKITNAFETKYNIL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggacgtatgcagtgaaagggaagaagcgaaaaaatagggaggagaggcgtgac
agagagcaagatgcaaagagagccattacagagaaaacaagtgatggtgaggaagaagga
aaggaggtggtgaatgaacttgagggtattccagttgccccaactgagcagaataatacc
aacaaaggcaggctcatcttcattcttgaaaaggcatctttggaagtcgcaaaagttgga
aagagttaccagcttttgaactcagatgaccatgcatatttcttgaagaaaaataacaga
aatccttctgattaccggcctgacattgttcatcaggctctcctaatgattttggatagc
caacttaataagagtgggatggtacaagctgtgtatgtgaaaacagagaaaggtgttctt
tttgaagttaaaccacatgctcgtcttccaaggacattcaagcatttctgtggtcttatg
ttgcagcttctacaaaaattgagtatcactgctgctggtaagcgtgagaaacttttgcgt
gtgatcaagaaccctgtaagccggtatcttcctgtcaattctcgcaaaataggcttgtca
tttagttctgaaaaattggttaatataaacaattatgtgagctctgcgggcaccggtgat
gttgatcttgtttttgtggttggtgcaatggcccatggtaaaattgatagggaggatgct
gatgattttatatcaatttccggttaccctctgagtgctgcatactgtattggaaagatt
accaatgctttcgagacaaagtataacatcttgtga
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