Quercus lobata (valley oak): 115959223
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Entry
115959223 CDS
T07350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115959223
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115959223
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115959223
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115959223
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115959223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
115959223
NCBI-ProteinID:
XP_030933415
UniProt:
A0A7N2MHW1
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All DBs
Position
9:17561108..17569259
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AA seq
1168 aa
AA seq
DB search
MRDIGYILGFQSLFLVFIAAIGFLIRRKWRLSVARKAEIKRLLVLAAEEAARVELEATTG
YGYGYSYSHSPADSVAAPAPAAAAPISTNYQCAVCYSPTTTRCARCKAVRYCSGKCQIAH
WRQGHKDECRPPSVADRDGIDGGGLESEGGQHANPIKTFPEEPALYDSGCSDESPSEKVD
GVKVEFVRDGKGTDSFSEASGDSFSGFSGSTTSGEVSDDASVGESSNESGGSDVNVPVDN
PLDVLETTGVDNMNQVKKLSPKFASLVDSAGVHSKSSKLDKIKPDCSEGESQSVSTSSSG
LGNSHSQGGSNAENCAVSSDFWGRTLESIGSTSDSPDNTALSNSDGSSKSKLSDSGSALH
FSFNFSESTSPLHSQGAEIKGTVSDDALKGASRIPKRVDRAALSENISVHSPKGQNSVSL
NSEGSSRTDNGTSSDSHTLKSREVKSMSSSSSYVHRSPSNPRDSMGTGDAYASNMPSSIS
ARSKHVVNDLVSNSHPLKSREVGSFSSSAFDARLASCSEGHSVPVKYGKVDGVQASASIP
SQVTNSSPNSRSGLKSSVQKVVNQFSGSKLSKHYPLKDECEVTKRYSEKELFPYKLFVKL
YHCNKVELSPCGLFNCGNSCYANAVLQCLAFTPPLHAYFLQGLHSKACVKKEWCFTCELE
SLVLKAKEGSSPLSPIKILSQLQNIGSQLGNGREEDAHEFLRYAIDTMQSVCLKEAGLKA
SGSSEEETTLMGLTFGGYLRSKIKCTKCQGKSERHERMMDLTVEIEGDIGTLEEALKQFT
ATETLDGENKYQCSRCKSYERAKKKLTIMEAPNVLTIALKRFQSGKFGKLNKPIRFPEIL
DLAPFCSGTSDTSPIYRLYGVVVHLDIMNASFSGHYVCYVKNSQNKWFKIDDSSVTAVEL
ERVLTKGAYLLLYARCSPRAPRLIRKRILSSDAKIKVIPSWFNGKNTSIPRSLSTHPSVA
PNFSGSNSRDGSTGFVSFYTRYCQLQRILEEDSSSDNSSLLSHNSDEGSCSTDSTRDSAS
TDDFPDCIFGDSGHGWNSPLRNPSDSDTCSSSSSSCSSPLCSKHSPNSYSERNASGFPET
SGSQTDCANSAMEGNGFRDRPPSGSSRLVDLGGQKGVTFLHSDSARHCRKLVNSSSCRQT
DSERLGLNACRDVQSGISFRKSASERRD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatatcgggtatatattagggtttcagagcctatttttggttttcatcgcggcg
atcgggtttctaatcaggcgaaaatggcggctctcggtggccagaaaagccgagatcaag
cggcttttggtgctcgcagcagaagaagccgctagagtcgagctcgaagccacgactggc
tacggctacggctacagctacagccacagccccgccgactcagtcgccgcgccggcgcca
gcagcggcagctccgatttccacgaattatcagtgcgccgtttgttactctccgactact
actcggtgtgctcgatgcaaggccgttagatactgttccgggaaatgccagatagcacac
tggcgacaaggtcacaaggatgaatgtcgtcctcctagtgttgctgatcgtgatggaatc
gatggcggtggtcttgagagtgaaggcgggcagcatgcgaatccaatcaaaacgtttcct
gaggaacctgctctgtacgattctgggtgctctgacgaatctccatctgagaaggttgat
ggtgttaaagtggagtttgttcgagatggtaaagggactgattctttttccgaagcatct
ggtgactcgttttctggattttctggttccaccaccagtggtgaagtatctgacgatgct
tctgtgggtgaaagttcgaatgagtccgggggatcggatgtaaatgtgcctgttgataat
cccctcgatgtgcttgagactactggtgttgacaacatgaaccaagtcaagaagttatct
ccaaagtttgctagtttagttgattctgcaggtgttcatagtaaatcaagtaaactagat
aagatcaaacctgattgtagtgaaggagagagtcagagtgtgtcaactagtagttcaggt
ttggggaatagtcactcacaagggggttcaaatgctgaaaattgtgctgtgtcttctgat
ttttggggtagaactcttgaatccattgggtcaacaagtgattccccagataatactgct
ctgtccaattctgatggatccagcaagagtaaattatctgattctggatctgccttacat
ttttcattcaatttttctgaaagcacttctcctttgcattcacaaggtgctgagataaaa
ggtaccgtatcagatgatgctcttaaaggtgcttcgaggattcctaagcgtgttgacaga
gcagctttatcagaaaacattagtgttcattctccaaagggccagaactctgtatccttg
aacagtgaagggtctagtcgtacagataatggcactagcagtgattcacatacgttgaag
tccagagaagttaagtctatgtcatcatcctcttcgtatgttcatcgatctccaagtaat
ccaagagattcaatgggtacaggtgatgcatatgccagtaacatgccatcctcaatctct
gcaaggtcaaagcatgttgttaatgaccttgtcagtaattcacaccctttgaagtctaga
gaagttggatctttttcatctagtgcttttgatgctcgtttagcttcttgttctgaaggg
cattcagttccagttaaatatggaaaggttgatggtgttcaggctagtgcttctataccc
tcccaggttacaaattcttctccaaattctaggagtggcttgaaatcatctgtgcagaag
gtagttaatcagttcagtggatctaaattgtcgaagcactatccattaaaggatgaatgt
gaggttactaagagatactctgaaaaggagctctttccatataaattgtttgtcaagctc
tatcattgcaacaaggtggagttgagcccttgtggcctttttaattgtggaaacagctgt
tatgctaatgcagtgctccagtgcttagctttcactcctcctttgcatgcttattttctg
caagggcttcattcgaaagcatgtgtaaagaaagaatggtgtttcacctgtgagttggaa
agtttggttttgaaggcaaaagaagggagctctccactatctcctattaagatactttca
caactacaaaatattggaagtcagcttggtaatgggagagaagaggatgcacatgagttc
ctacggtatgctattgatacaatgcaatctgtctgccttaaggaagctgggttaaaggca
tcaggctcttcggaagaagaaaccactttaatgggccttacatttggaggctatctccgt
tcgaagattaaatgtacaaagtgccaaggcaagtctgagcgccacgaaaggatgatggac
cttactgttgagattgaaggagatataggaaccctggaagaggcccttaaacaatttacg
gcaactgagactttggatggtgaaaacaagtaccagtgtagcagatgtaaatcttatgag
agggccaagaagaaactgacaataatggaggctccaaatgttcttacaatagcactaaag
cgatttcagtcaggtaaatttgggaaactcaataagccaattcggtttccagagatcctg
gacttggcaccattttgtagtggaaccagtgatacgtcacctatatataggctttatgga
gtggtggtacacttggacatcatgaatgcgtctttttcgggtcattatgtgtgctatgtt
aagaacagccaaaataagtggttcaagattgatgacagctctgtaactgctgttgaactt
gaaagggtcttgacaaaaggggcatacctgctgctatatgccaggtgctcaccaagggcc
ccacggttgataaggaagagaatattatcttcagatgccaaaattaaagtcataccatcc
tggttcaatgggaagaatacatccataccaaggtccctgtccacacatccaagtgttgcc
ccaaatttttctggttcaaattctcgagatggttccaccggctttgtatctttctacaca
aggtactgccagttacaaaggatactagaagaggactcatcaagtgacaattcatccctg
ctcagccacaactctgatgaaggttcctgcagcactgatagcacccgcgattctgccagc
actgatgactttcctgactgcatatttggtgattcaggacatggttggaacagcccttta
aggaacccttctgactctgatacgtgttcttcctcttcctcttcctgttcttcacccttg
tgctcgaagcattcgcccaattcttattcagagcggaatgcttcaggtttccctgaaaca
agtggttctcaaactgattgtgcaaattcagcaatggaaggtaatggttttcgggacaga
ccacccagtggtagtagcaggctggtggatttgggaggccagaaaggtgttacttttttg
cattctgactcggctagacattgtagaaagttagtgaatagtagtagttgtaggcagact
gactcagagagattaggattaaatgcctgccgcgatgtacagtctggcatatcttttaga
aaatcggcaagtgaacgaagagattag
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