Quercus lobata (valley oak): 115959241
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Entry
115959241 CDS
T07350
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
qlo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115959241
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115959241
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115959241
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115959241
03036 Chromosome and associated proteins [BR:
qlo03036
]
115959241
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115959241
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115959241
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115959241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
115959241
NCBI-ProteinID:
XP_030933440
UniProt:
A0A7N2MMQ6
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All DBs
Position
9:39877800..39893543
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AA seq
539 aa
AA seq
DB search
MDIDVVVDDVTLDPELLQLPEVSPTALKLSPLIAEELFSQWLALPETGRLVKSLIDDAKE
GASFNALANSFNANAAGSTSLPSMFPAGSAPPLSPRSSSGSPRISKQRSSPSSLGSPLKL
IIEPVREIIPQFYFQNGRPPPVELKEQCLSRIDDHFNNHMDGYQIHEFRSVTKEICKLPS
FFSSTLFRKIDTNCTGVVTRDGFIKYWVDGNMLTMDAATKIFKILRQPECKYLTQLDFKP
VLRELLVTHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGRLTLRELKRGNLIAAMQ
HADEEEDINKVMRFFSYEHFYVIYCKFWELDTDHDFLLDKENLIKYGNHALTYRIVDRIF
SQVARKFTSKVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVITHNEMQFFY
EEQHHRMECMALEPVIFEDILCQIVDMISPEREDYITLRDLKGCKLSGNVFNILFNLNKF
MAFESRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDVSNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatgtggtagtagatgatgttactttggaccctgaactattgcaacttccc
gaggtgtctccgacggcgctcaaattgagccctctgattgctgaggaattgttctctcag
tggcttgcgcttccagaaactggaagactggtgaaatctcttattgatgatgcaaaggaa
ggtgcttcctttaatgcccttgcaaactcttttaatgcaaatgccgctgggagtacttca
ttgccttccatgtttcctgctgggagtgcacctccactttctccaagaagttcgtctggt
tctccacgcatatcaaagcagagaagcagtccctcttctcttggatctcctcttaaatta
attattgaaccagtgcgagaaatcatacctcagttttacttccaaaatggtcgtccacca
ccagtggaactaaaagaacaatgtctttctagaattgatgaccattttaacaatcatatg
gatggatatcaaatacatgagtttaggtcagttacgaaagaaatatgcaagctcccatcg
tttttttcctctacacttttcagaaagatagacaccaattgcactggggtagtgaccagg
gatggatttatcaaatattgggttgatggcaatatgctgacaatggatgcagcaactaaa
atattcaaaattctaaggcagccagaatgcaaatacctcactcagttagacttcaaacct
gttcttcgagagcttttggtaacccatcctgggttggaattcctacagagcacacctgaa
tttcaagaaagatatgctgaaactgtcatatacagaatattctactacatcaacagatca
ggaaatggccgtcttactcttagagagctgaaacgaggaaatctaattgctgccatgcaa
catgcagatgaggaagaggacatcaataaagtcatgaggttcttttcttatgaacatttt
tacgttatatactgcaaattttgggagcttgatacggaccatgacttcttacttgacaaa
gaaaacctcatcaaatatggtaaccatgccctaacctacagaattgttgatagaatattt
tcacaggttgcaaggaagtttacaagtaaggttgaagggaagatgggttatgaagatttt
gtttacttcatgctgtcagaggaagataagtcatctgagcccagtctagagtattggttc
aaatgcatagatttggatggaaatggagttattacccacaatgaaatgcaattcttttat
gaggagcagcaccatcgtatggaatgcatggccctagaacctgtgatatttgaggatatt
ttgtgtcaaattgttgacatgatttcaccagagagggaagattatattacactacgtgac
ttgaaaggatgcaaactttctggaaatgttttcaatatccttttcaatcttaataaattc
atggcttttgaaagtcgtgatccatttctcatccgtcaggaacgagaagatccaactttg
acagaatgggaccgctttgcacatagagagtatattcggctttcaatggaagaagatggt
gaagatgtctctaatggaagtgcagaagtttgggatgagtcacttgaagctcctttttga
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