Quercus lobata (valley oak): 115959550
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Entry
115959550 CDS
T07350
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115959550
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
115959550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ubiq-assoc
Motif
Other DBs
NCBI-GeneID:
115959550
NCBI-ProteinID:
XP_030933849
LinkDB
All DBs
Position
9:14212887..14224127
Genome browser
AA seq
1644 aa
AA seq
DB search
MRTRFLNIDYFSPIQALEPQAFLHLPVPHLPPPPSLSSFNDLFTSFASPLHVSSALHDLP
LDSALSDFLSAVLPHRIDHADIEHSDAAAPTPRFRETRLSQQEAEVLYEEKEVESQGTCG
TETLEIGLPNKDNRDASRYEVIQFETPEPNVFLEDACSFEKYEIQNLSEVPDNENNQEML
RQALTMQCPYEVQELIYSVENVASEYYMEQNIYVLEDDGSVQDQMCFGRSIFPSLEVDET
SLGTLTCSSIKEELLLHLENTERQCWLHKDDLVIDSEELLGSRGCDISQFLSDNFLSQQC
LESELASVDMFPEMDFISMVETLQIEGNSSVSPVIFEEFQFLDMDSSQFFVVFFKTQTTD
EPETCDCMFRGDMNFKNFNELIVSHELALVDNIFKSLPVPLFSDHEKIRSLSSIVEEILA
DLKPQPLSASDGIYLDWHLLDEDKCNSRIYSSYQSMLEEVDSHSFDFDLEAFDNGKLVFD
FVFSDNALNGPNTEENKESRKFLSDVISVPNGDIVGGTSNKLLDDQYPEPGNGEHLAEKS
AERTLLFKSMSQFNDLDFFLNPRKANSGNVDSTINTVDTNAMIPDVPSSHSKAACLSTGV
QLQSWEIVLYQVKLSNTIMLIIDNFEKSYLAVLQNERELIKTDLPLLAADNHKLLSLPKQ
KLMDCIKKINAQRTTSHGDENIMELVTLCAIKQMAWFMCFYGILPVHLYVDKLCQSLECL
KSRLGILQSLIEDAHKKTDREICSLHPSLTVIQEILRSNTTKSNLKVLIVAEKIFWWSLK
SLLMSLGLSFSEFQNYYPHAKEPDLCKTDFEFTRTDTSLVPDCLLASHEHISASFPFNKF
NIILEYGGSYGISRISSFSPNLVGLPPIHFLKVELDKSSTCEALCEGVDMPCYSETTMQE
DGNIKKLEKLLNFLPIENTFDMGSSGAADEAEACCMPLPLPTMPFAMKSENISQSMVSSP
ETIIIVNTQNFDKQMIVSRRSTYQKILAMEKEGAQVVERDSDLPVDVIMSSAICLAWYDC
RNIGKKATALDEASSSMPMCVENIATNVLTLLSFAFSGCILVFEGDVNFLSTVMESSDGF
YAAAASLGIDLQIFCSYSSELTDDIILSCISYVIKLTRGLFPKMPESETLAESFLTKFPS
INPLTAHAILSSGGILVEFLEGSHERRIHAIENYLVSDESVTLFSALCKYGERDDSKSIM
TDCSSSVSSGPDSERCRFNVDSGRKRRKYSGSPHKIDIDMDDLLCFEPLNQITADNLDPS
TVSKSLNQWMSKDYELFDEFRTPSLTSNGLFGQKQGLDMGMMIKPSSVTKPCDSQFSKSP
PISNEIKKPYFSLSDKKFGQNQGSDLAMMNNLDWLSAKKPENLQDLIGEVIDLTDSPVSG
KDLSSFDNSPNFSFWVPEMDGDSSRKSKIARRLSFDEGGHPTCLMAVEMNSNSDIWNFKK
DQRQTVPGVNDYPDTDFNDIFPVKHRGMPNEGLTQRSAGNSKELSFQEKEMSSYGGTPLS
NALRSAHPQQNSPWTIEFLNRIREKSRMRHQSLPYDAVAPSLEYSGNVSKVSKRRSPSIL
EFFKYQGGSTPKKAPEQKRQKRSIMPSSSSKNEKISSSVLPTSTPADKRARQTLSFAMNG
SGGQTKLVWSDGARSLNKRFQNQI
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcggttcctgaacatcgactacttctctccgatccaagccctagaaccccaa
gccttcctccacctcccagtccctcaccttcctcctcctccctctctctcctccttcaac
gacctcttcacctccttcgcttcgcctctccacgtttcctccgctctccacgacctccct
ctcgattccgctctctccgatttcctctccgccgttctccctcaccgcatcgaccatgcc
gatatcgaacactccgatgccgccgctccaacacctcgcttccgcgagactcggctttcg
cagcaagaagctgaggttctctatgaggagaaggaagtggagagtcaaggaacttgtgga
actgaaactctggagattggactgccaaataaggataatagagatgcaagcagatatgaa
gtaatccaattcgaaacaccagaaccgaacgtgttcttggaagatgcctgctcttttgag
aaatatgaaatacaaaatctgtctgaagttccagacaatgaaaataatcaggaaatgctt
aggcaagcacttacgatgcaatgtccttatgaggttcaagaattgatttattcagttgaa
aatgttgcttcagagtactacatggagcaaaacatttatgtcttggaagatgacggttct
gttcaggatcaaatgtgctttggccgaagcatatttccttctctagaagttgatgaaaca
agtctgggaactttgacatgctcgtctataaaggaagaacttcttttacatcttgaaaac
actgagcgccaatgttggcttcataaggatgacttggtcattgacagcgaggaacttttg
ggctcaaggggatgtgatatctcacagtttctttcagataattttctatcacagcaatgc
ctggaatctgaactggcatctgtggacatgttcccagaaatggacttcataagcatggtg
gaaactttacagattgaaggaaactcctctgtgagccctgttatttttgaggaattccag
ttccttgatatggattcgtctcaattttttgttgtcttctttaagacacagaccacagat
gaaccagaaacatgtgactgcatgtttaggggagacatgaactttaagaattttaatgaa
ttgattgttagtcatgaactagccttggtagataacatattcaaatcattgcctgttcct
cttttctctgatcatgaaaagataaggtcactatcctccattgttgaagaaatactagct
gacttaaagccacagcccctatctgcatctgatgggatatacttggattggcatcttttg
gatgaagataaatgcaactctagaatctattcttcctatcagagtatgttggaggaggta
gattcacatagctttgattttgatctggaagcttttgataatggcaagttggtatttgac
tttgttttctcggataatgctttgaatgggccaaacacagaagaaaacaaggaatcacgg
aagtttctttctgatgtcatttctgtgcctaatggtgatattgtgggagggacttcaaac
aaattgttggatgatcaatatccagaaccaggaaatggagaacatttagctgaaaaaagt
gctgagaggactttgttgttcaagtctatgtcacaattcaatgatcttgattttttcttg
aatcctcggaaagctaattctgggaatgttgactctactattaacactgttgacactaat
gctatgattcccgatgttccatccagtcactcaaaggcagcatgtttgtccactggagta
caattgcagagttgggaaattgtgttgtatcaagttaagctttctaatactattatgctc
atcatagacaacttcgaaaagagctatctagctgtcctgcaaaatgaaagagagctgata
aagacagatctcccacttctagcagcagataaccataaattgctcagccttccaaaacaa
aaattgatggactgcattaagaaaataaatgcacaaagaaccacttctcacggagatgaa
aacattatggaacttgttaccttatgtgcaattaaacagatggcttggttcatgtgtttt
tatggaatccttccagtgcatctttatgtagacaagttatgtcaaagcttggaatgctta
aaatcaagactcggcatcctacagtccttgattgaagatgcacacaagaagactgacaga
gaaatatgtagcttacatccctcactgactgttattcaggagattttgcgttcaaacact
accaagagtaacttaaaggtattgattgtggctgaaaaaatattctggtggtcgttgaag
agtttgttgatgtcgttgggattatcatttagtgagttccaaaattactatccacatgca
aaggaaccagatctgtgtaaaacagacttcgagtttactagaacagatacctcgctggtt
ccagattgcctattggcatcccatgagcatatttctgcatcatttcccttcaacaaattc
aacataatcttggaatatggaggttcgtatggcatatctagaatatcgtctttttcccca
aatctggttggattgcctcctattcacttcttgaaagtggaactggataaatctagcact
tgcgaagcactgtgtgaaggcgttgatatgccctgttatagtgaaacgacaatgcaagag
gatgggaatatcaagaagttggagaaactgctaaactttttacccattgagaacactttt
gacatgggatcttcaggagctgcagatgaagcagaagcttgctgtatgcctctgccactt
cccaccatgccatttgcaatgaaatctgagaatatttcacaaagcatggtgtcttcccct
gaaacaatcatcattgtgaacactcaaaattttgataagcaaatgatagtatccagaaga
agtacctaccaaaaaattcttgccatggagaaagaaggagcacaggttgtggaacgagat
tcagatttgcctgtggatgttataatgagttctgctatttgcttagcatggtacgattgc
agaaacattggaaagaaagcaactgcattagatgaagcttcttcatccatgcctatgtgt
gttgagaatattgcaacaaatgttttaacattgctgagttttgcattcagtggctgcatt
ctggtctttgagggagatgtcaacttcctttccactgtaatggaatcctctgatggattc
tatgctgcagcagcaagcctgggaattgatttgcagatcttttgctcctattcatctgag
ttgacggatgatattatattgagctgcatcagttatgtgattaagttgactagaggccta
ttccctaaaatgcccgagtcagaaactcttgcagaatcatttcttaccaaatttccttcc
attaatcctttgacagctcatgcaatactgtcttcaggaggcattctcgttgaatttctt
gaagggtcacatgaacgcaggatccatgcaatcgaaaactaccttgtttctgacgagagt
gtcaccctgtttagtgctttgtgcaaatatggtgagcgggatgattctaaatctataatg
acggactgctcttcctcagtatcttctggtcctgactcagagaggtgtcgttttaatgtg
gattctggaagaaaaagacgaaaatacagtggcagccctcacaaaattgacatagatatg
gatgacttactgtgttttgagccattaaaccaaatcactgctgacaacttggatccttct
acagtatccaagtcattaaatcagtggatgtcaaaagattatgagctatttgatgagttc
agaacaccaagtttaacttcaaatggtttatttggtcaaaaacagggattggatatgggt
atgatgataaagccctccagtgttaccaagccatgtgattctcaattctctaaaagtcct
cccatatcaaatgagataaaaaagccttatttctctttgagtgacaaaaagtttggtcaa
aatcagggatcagatttggctatgatgaacaatttggattggcttagtgccaagaaacct
gagaatctgcaggaccttataggtgaagttattgacctaaccgatagtcctgtatcaggt
aaggacttgtcttcttttgataattccccgaatttttcattttgggtgcctgagatggat
ggtgactcctcaagaaagtctaaaattgcaagaagattgtcatttgatgaaggcggtcac
cctacttgcttgatggctgtggagatgaattcaaattcagatatctggaattttaagaaa
gatcagaggcaaactgtgccaggagtcaatgattacccagatacagatttcaatgatatt
tttcctgtaaaacaccgtggaatgcccaacgaaggcttaacacagagatctgcaggaaat
tcaaaggaattatcattccaagagaaggagatgtcatcttatggtggaacaccactctca
aatgctctccgttcagcccatccgcaacaaaactcaccttggacgatagagtttcttaac
agaatcagggaaaagagcagaatgcgtcaccagtcccttccatatgatgcagttgctcct
tctttggagtattcagggaatgtatcaaaagtttccaagagaagaagtccctctattctt
gaatttttcaagtaccaaggaggcagcactcctaaaaaggcaccagaacaaaagaggcag
aagcgatctataatgccatcaagctcatctaaaaatgagaagatttcatcctctgttctt
cccacatcaacacctgctgataagagagcaagacagactctatcttttgcaatgaatgga
agtggaggccaaactaagctggtttggagtgatggagctcgcagtctgaacaaaaggttt
caaaatcaaatataa
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integrated database retrieval system
