Quercus lobata (valley oak): 115959609
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Entry
115959609 CDS
T07350
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115959609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115959609
03036 Chromosome and associated proteins [BR:
qlo03036
]
115959609
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115959609
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115959609
PBAF complex
115959609
GBAF(ncBAF) complex
115959609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
CLP1_P
DUF7685
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
115959609
NCBI-ProteinID:
XP_030933914
UniProt:
A0A7N2MKX7
LinkDB
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Position
9:complement(33719970..33735722)
Genome browser
AA seq
795 aa
AA seq
DB search
MPASPSFPSETRTKWKKRKREPQIYRRQMHDEEDEDEEDNHHDDLDPQNDSEDPQSDAVP
LDPNGLNESEVLSDAGARISDFPPVVRHAVNRPHSSVLAIAALERANESGDSKGQNSMVL
ENVSYGQLQALSAVPADCPVFDQDRMDGAAAAAAAAAAYVITPPQIMEGRGVVKRYGSRV
HVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNYIVAKYMENPEKRLVV
SDCQGLVAGVDNEDLNRIVRFLDHWGIINYCAVAPSREPWNGGSYLREDPNGEIHVPSAA
LKSIDSLIKFDKPKCRLKAADVYSSLSSHDADASNLDNRIRERLSENHCNYCSRSLPTVY
YQSQKEIDTLLCSDCFHEGRFVTGHSSIDFIRMDSTNDYGDPDGESWTDQETLLLLEAME
IYNENWNEIADHVGTKSKAQCILHFLRLPMENGLLENIEVPGISSNSSNGDDRGRSNSNY
NGDSAGSCHEDADPESRLPFANSGNPVMALVAFLASAVGPRIAAACAHASLAALSDENGL
SASGSIIQIEGSGHGNRMNSESVHGREGVRHGEIANSIHQKEENSGVHGSWGQNEAKIPL
SAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFL
MKECEQVERTRQRIAAERARMISARFGSAGATSPMILPGVGPSMVNNNTSNNRQQIISAS
PSQPSIPGYNNNQPVHPHMPFMPRQQMFGMGPRLPMSAIQQSPTSNVMFNSSGNVQPTLN
QPMLRPVSGTSSSLG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccccttccttcccttcagagacccgcaccaaatggaagaagcgaaagaga
gagccccaaatctaccggaggcagatgcacgacgaagaagacgaagacgaagaagacaac
caccacgacgacctagacccccaaaacgactccgaggaccctcaatccgacgccgttccg
ctcgatcccaacggccttaacgagagcgaggttttgtccgacgccggcgcccgaatctcc
gacttccctccggtcgtcaggcacgccgtcaatcgccctcactcctccgtgctggctatt
gcggccttagagcgtgccaatgagagtggagacagcaagggccagaattcgatggttttg
gagaatgtttcgtatggtcagctccaggcgctttccgccgtgcctgccgattgtcccgtg
ttcgatcaggacaggatggatggcgctgccgccgccgccgcagccgccgctgcctatgtg
atcacgccgccgcagattatggaaggccgcggggttgtcaagcggtatgggagtagggtt
catgtggtgccaatgcattcagattggttttcaccggctacagtgcatcgactggagagg
caagtggtgccacatttcttctctgggaaatcaccagaccacacaccagagaaatacatg
gaatgcaggaactacattgtcgccaaatacatggaaaatccagagaagaggctcgtggtc
tctgattgccaaggactggtagctggtgttgataacgaagatttaaatcgaattgttcgg
tttcttgatcattggggaattatcaattattgtgctgtggcaccaagtcgtgagccttgg
aatggtgggtcctacttaagggaggatccaaatggtgagatccatgtgccgtcagctgct
ttaaagtccattgatagtttaatcaaatttgacaagcccaaatgtcggctcaaagcagct
gatgtttattcgtcattgtcatctcatgatgctgatgcctctaatctggacaacagaatc
cgtgagcgtctgtctgaaaatcattgcaattattgttctcggtctcttcccactgtgtac
tatcagtcacaaaaggagattgatacactactatgctctgattgcttccatgaggggagg
tttgttactggccattctagcatagattttataaggatggattctactaatgattatggt
gatccagatggggaaagttggactgatcaggaaactttactactacttgaggcaatggaa
atctacaatgagaattggaatgaaattgccgaccatgttggtaccaagtctaaagcacaa
tgcattcttcactttctccgtctacccatggagaatggcctactggaaaatattgaagtt
ccaggcatatcatccaactcgtcaaatggagatgaccgtggaagatcaaattcaaattat
aatggggattcagcaggatcctgccatgaagatgctgatcctgaaagcagactccctttt
gcaaattctgggaatccagttatggccctggttgcctttttggcctctgctgttggacca
agaattgccgcagcctgtgcccatgcttctttggcagcattgtctgatgagaatggctta
tctgcttctggaagcattatacagatagaaggatctggacatggtaataggatgaactca
gagagtgtacatggcagagaaggtgttcgtcatggagaaattgcaaattcaatccatcaa
aaagaagagaattcaggagtacatggttcatggggtcaaaatgaggcaaagattccatta
tctgcagaaaaagttaaagctgctgctaaagctggccttgctgctgcagcaacaaaggca
aagctgtttgcagatcatgaagaacgggaaattcagcggctatctgctaatatcataaat
catcagttgaaaagattggagctgaagctgaagcaatttgctgaagtggaaacgtttttg
atgaaagaatgcgaacaagttgagaggacaagacagaggattgctgctgagagggcccgc
atgatatcagctcgatttggatctgctggggccacttcaccaatgattctaccaggtgtt
ggtccttccatggttaacaataataccagcaacaataggcaacaaattatatcagcttca
ccttcacagccgagcattccgggatataataacaatcaaccagtccatccccacatgcca
tttatgccgcggcagcaaatgtttggaatggggccaaggttgcccatgtcagcaatacag
cagtcacctacttcaaatgtcatgttcaactcttcagggaatgtacagcctactctcaat
caaccaatgcttcgacctgtatctggtactagctctagtttaggttag
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