Quercus lobata (valley oak): 115959616
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Entry
115959616 CDS
T07350
Name
(RefSeq) flap endonuclease GEN-like 2 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115959616
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115959616
BRITE hierarchy
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GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
XPG_I_2
IMEF_Flp
Motif
Other DBs
NCBI-GeneID:
115959616
NCBI-ProteinID:
XP_030933930
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Position
9:29384474..29393960
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AA seq
621 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVSKSHSCMKEKVYLRGLFHR
LRALIAVNCTIVFVTDGSIPAIKLSTYRRHLNSGSEVTQDDRNLQNVTSLQRNMGSEFSC
MIKEAKVLGMALGIACLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL
GDGGYVTCYEMTDVERRLGFGRNSLITLALLLGCDYSQGVHGLGPESACQIVKSIGENVV
LQKVASEGLSFIKKKRSSKKQGAVSKCNNSKENSLDHDMNVNGSKHDSQRDDQHLQVIDA
YLKPKCHSADSDAVHRALAQNPFQRAKLQQICAQFFEWPLEKTDEYILPKIAERNLRRFC
NLRSTSSDLGLKLTLHKIPVKCPVSKIIKHRKVQGRDCYEVSWDDLDGLKTSIVPADLVE
RGYPVLHLELSKQKVLQSFFRYFLVVFWISKYACPEKIVEFEEESAERKKQNHRKTRTKK
SEKGSSVTEIDLKLQRLLLDIELESSSVHNASFSSNVEISESRTAAPEVDLTNQDLWHDP
KSSDDISCNEVGPSTAKSEVIDLLSPSPPRQSRIVSKFPKSNGQCIDVIDLSESETDVSP
EHKRKARELRLFLASIRDEIS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagaacttgtgggatatcttggaatcatgcaagaaaactctaccacttcac
catctccagaacaagagggtgtgcatcgatctctcttgctggatggttcagcttcaaaac
gttagcaaatcgcactcttgtatgaaagagaaggtttatctcagaggtctctttcaccgc
ctcagagctctcattgctgttaattgcaccattgtttttgtcacagatggatccattcct
gctattaagttatcaacttatagacgccacttaaattcaggaagtgaggttactcaagat
gatagaaacttgcaaaatgttacctctctacaaagaaatatgggatctgagttttcatgc
atgataaaagaggctaaagttttgggcatggcacttggcattgcttgcttagatgggatt
gaggaagctgaagcacagtgtgcattactaaactccgaatcgttatgtgatgggtgtttc
acttcggactcagatgtctttctttttggtgcaaggaccgtgtatagagatatatgcctt
ggagatggtggttatgtcacttgctatgaaatgacagacgttgagagacggcttggattt
ggaaggaactcattgattacccttgcactacttcttggctgtgactactctcaaggagtt
catggtctgggtcctgagtccgcttgtcagattgttaaatcaattggagagaatgttgtt
cttcaaaaagttgcctctgaaggactgtccttcataaaaaagaaaagaagttcaaagaaa
cagggggccgtttccaagtgcaataatagcaaggagaactcactggatcatgatatgaat
gttaatggaagtaagcatgattcacaaagggatgatcagcacttgcaagttattgatgca
tatttgaagcccaagtgccactcggcagattctgatgctgtgcatagggctcttgctcaa
aatccctttcaacgtgccaaacttcagcagatatgtgctcagttttttgagtggcctctt
gagaaaacagatgagtatatccttccaaagattgctgaacgaaacttacggcgattttgt
aatttgcgatcaacttcatcagatctaggactgaagcttacattacacaagataccagtt
aaatgccctgtgtctaaaattatcaagcatcgaaaggttcagggaagagattgttatgag
gtctcatgggatgatttagatggacttaaaacctccatagtaccagcggatcttgtagag
agagggtatccagttctacacctggaactgagcaaacaaaaagttctacaatcatttttc
agatatttcttggtggtattctggataagcaaatatgcttgtcctgagaagattgtggaa
tttgaggaggaaagtgctgaaaggaagaaacaaaatcacaggaaaacaaggacaaagaaa
tcagaaaagggatcttctgtgactgaaattgatctaaaactccaaagactattacttgac
atcgaattagaaagcagttctgttcacaatgcctccttttcttcaaatgtggagatatca
gaaagccgtactgctgcaccagaagttgatctaacaaaccaagatctgtggcatgatcca
aagagcagtgatgatatatcttgcaatgaagttggtccaagtactgctaaaagtgaggtt
attgatctcttaagcccttccccgccaagacaatcccgtatcgtatccaaatttccaaaa
tcaaatggtcaatgtattgatgtaattgatttgagtgaatcagaaactgatgtgtctcct
gaacataagaggaaggcaagagagttaagattgttcttagccagcattagggatgaaatc
tcttga
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