KEGG   Quercus lobata (valley oak): 115959654
Entry
115959654         CDS       T07350                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115959654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115959654
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115959654
 Complex B
    115959654
 Complex C
   U2 SnRNP specific factors
    115959654
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 115959654
NCBI-ProteinID: XP_030934005
UniProt: A0A7N2MJ27
LinkDB
Position
9:22986266..22989948
AA seq 806 aa
MLGALPILPLPAPPSDGNLGPLPPAQLTDDDEKPSSNESAPLPVSVASHTRTIGIIHPPP
DIRTIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNLS
PAQQPGDSALPVATESSAPSAPPTTTDAIEAAKADLSALFKPVRKVLDPPEAEQYTVRLP
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTDKLKKSVADMTTVLERCVNRLEWERSQEQARQKAEDEKEQERIEMAMIDW
HDFVVVESIDFVDDEDEDLPPPMTIEEVIRRSKVSAMEEDTDIVEPGKEVEMEMDEEEVQ
LVEEGMRATSLEENDDGKQNEMKVREEPEPPMRIVKNWKRPEDRIPAERDPTKFVVSPIT
GELIPNNEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFG
TTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQNIGEDQNDGSNNDGRN
LPGPAAPPPRPGVPSIRPLPPPPALAMNLLRVNPVQYSAAPSGGLPVPMPRPPVMQMIPS
VRPPPPPMTMTSGQQSLMVNRPPPMPLSMSMNAPSIPVPHPPGSQFTPMQVPRPYAPLPV
TQPNMSMMPPPPLPQGMPPPPPPEEAPPPLPEEPEPKRQKLDDSLLIPEDQFLAQHPGPV
RIAVSAPNVDEGNLKGQLLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDN
MSLAYYNVGAGETLTLSLRERGGRKR
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgttaggtgctttgccaattttgccccttcctgctccaccctctgatggaaatcttggg
cccttaccaccagctcagttgactgatgatgatgaaaaaccatcatcaaacgagtcagct
cccttgccggtgtcggtggcgtcacacacgagaactattggtataattcatcctcctccg
gatatcagaaccattgttgacaaaacgtctcagtttgttgccaagaatggtcctgagttt
gaaaagaggattattgctaacaatgctggcaatgtcaagttcaattttttgaattcttct
gatccttaccatgcttattatcaacatcgtttatcggaatttcgtgctcagaatctatct
ccggcacagcagcctggtgattctgctctgcctgtggctactgagtcatcagcaccatct
gctcctcctactactactgatgctattgaggcggcaaaggctgatctgtctgctttgttt
aaacccgttcgtaaagttcttgaccccccagaagctgagcaatatactgttcggctccct
gaagggattactggggaggaattggatataattaagctcacagcgcagtttgtggctcgg
aatgggaagtcgttcttgacggggttgactagtagggaaattaataacccccagtttcat
tttttgaaaccaactcacagtatgttcatgtttttcacttcacttgcggatgcgtattcg
aaagttttgatgcctccaaagggtttgacggataagctaaagaagagtgtagctgacatg
acaactgtgcttgaacgatgtgtgaatcggcttgagtgggagcgttcacaagagcaggca
aggcagaaagctgaggatgaaaaggagcaggaaaggatagagatggctatgattgattgg
catgattttgttgtggttgaatcgatagactttgtggatgatgaggatgaggacttaccc
cctccaatgaccattgaggaggttataaggagaagtaaggtgtcggctatggaagaagat
actgatattgttgagccaggaaaggaggtggaaatggaaatggatgaggaagaagtgcag
cttgttgaagagggcatgagggcaactagtcttgaggagaatgatgatggaaagcaaaat
gagatgaaggtaagagaagaaccagaaccaccaatgagaattgtgaagaactggaagaga
ccagaggacaggatacctgcagaaagagacccaacaaaatttgttgtttctccaattact
ggtgagctaatccctaataatgagatgtctgaacacatgaggatttccctcattgatccc
aagtacaaagaacaaaaagaaaggatgtttgctaagattagggagaccacacttgctcag
gatgacgagatatctaggaacattgtgggacttgcacgaacacgtccagatatatttggt
accacagaggaagaagtctctaatgctgtcaaggctgagattgagaagaagaaagatgag
caaccaaagcaagtcatatgggatggtcacactggaagcattggacgcactgctaaccag
gccatgtcacagaatattggagaggatcaaaatgatggttctaataatgatggaagaaac
cttcctggtcctgcggctcctcctcctagacctggtgtgccatccattcgtccacttcct
ccaccacctgcactagccatgaatcttcttcgtgttaacccagtacagtattctgctgca
cctagtggtgggctccctgtacccatgcccaggccaccagttatgcaaatgattccttcg
gttcgaccacctccacccccaatgacaatgacttctggacagcaatctcttatggtgaat
cgaccacccccaatgccactatcaatgtctatgaatgctcctagtattcctgtaccacat
ccaccaggttctcagtttacaccaatgcaagttccccgaccttatgcccctcttcctgta
acccaacctaacatgtctatgatgcccccaccacctttgcctcaaggaatgcctccacca
ccaccaccagaggaagctcctccaccacttcctgaagaaccagagccaaagaggcagaag
cttgatgattctttgcttattccagaagaccagtttcttgcacagcatccggggcctgtc
cgcattgctgtctctgctcccaatgttgatgaaggaaatcttaaagggcagcttctggag
attacagtgcagtctttatctgaaactgttggcagccttaaggagaaaattgcaggggag
atccagcttcctgccaataaacagaaattgagtggaaaacctggctttctcaaggacaat
atgtcgctggcatattataatgttggagcaggagaaacacttacactttctttaagagag
cgtggtggtagaaaaagatga

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