Quercus lobata (valley oak): 115959734
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Entry
115959734 CDS
T07350
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115959734
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
115959734
Condensin II
115959734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
PspA_IM30
AAA_15
AAA_13
AAA_29
Taxilin
Baculo_PEP_C
LacI
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
115959734
NCBI-ProteinID:
XP_030934124
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All DBs
Position
9:complement(5642759..5654439)
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AA seq
1173 aa
AA seq
DB search
MHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSIVFNNSDRTRSPLGYEDHREITVTRQIVVGGRNKYLINGK
LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKES
ALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLKRFCIAYEFV
QAERIKDNAVCGVEQVKARIAETDDNMGTMRAEIQEMETEVSKLTAEKEASMGGEVKSLS
EKVDTISQDLVREVSALNNKEDTLKSEKENAEKIVNNIEDLKHSVEEKASAVRKAEEGAS
DLKKRFEELTKSLEEYENDYQGVLAGKSNGNEEKCLEDQLGDAKVAVGSAETELKQLKTK
ISHCEKELKEKRRQLMSKREEAVSVEKELKARTSDVENVKKALESLPYKEGQMEALQKDR
ASELELVQKLKDEIRNLSAQLANVEFTYRDPMRNFDRSKVKGVVAKLIKVRDSSTMTALE
VTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQSHVVPPRVQHSAVRLVGNDN
AELALSLVGYEEELKTAMEYVFGSTFVCKTVDAAKEVAFNREIRTRSVTLEGDIFQPSGL
LTGGSRKGGGDLLRQLHHLAEAESKLYAHQKMLSEIEAKIAQLMPLQKKFTGLKTQLELK
SYDLSLFQGRAEQNEHHKLGELVKKIELELEEAKSAAKEKQLVYENCVNTVSLLEKSIKE
HGDNREGRLKDLEKKIKAVKAQMQSSSKAVKGHENEKERLVMEMEAVVQERASLEAQLVS
LRTQIDSLTAELEEQKAKVAATRNNHDQAQSKLNLIRQKMKECDSQISCILKDQQKLQHK
LSETNLERKKMENEVKRMEMEQKDCSTKVDKLIEKHAWIAPEKQLFGRSGTDYDFASRDP
IKAREELERLQVEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEEL
DEKKKETLKVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKTHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaggagatatgcttggaagggttcaaatcctacgcgacgagaaccgtggtc
ccagggttcgacccgtttttcaacgcgattacgggtctcaacgggtccggcaagtccaac
atcctcgattcgatttgcttcgtgctcgggatcacgaatttgcagcaggttagggcttcg
aatcttcaggagctcgtgtacaagcaaggccaagcgggaattactaaggccactgtgtcc
atcgtcttcaataactccgaccggactcggagcccactcgggtacgaggaccaccgcgaa
atcactgttactcgacagattgtggttggtggaaggaacaaatatctgatcaatggaaaa
cttgcccagcctagtcaggttcagaatcttttccattcggtgcagcttaatgttaacaat
ccacattttcttataatgcaagggcgtattaccaaggttttaaatatgaaaccccctgag
atcctgtccatgcttgaagaggctgctggtacaagaatgtatgagacaaagaaagagtct
gcattgaaaacacttgagaagaagcagagtaaggttgatgagatcaacaagcttcttgac
caggaaatactgcctgctttggagaagttgaggaaagaacggacacagtatatgcaatgg
gcgaatggcaatgctgagttggatagacttaaaaggttttgcattgcttacgaatttgtt
caagcagagaggattaaagataatgcagtatgtggggtggaacaggtaaaggccaggatt
gccgagactgatgacaatatgggaactatgcgggcagaaatacaggagatggagactgaa
gtatcaaaattgactgctgaaaaggaagcaagtatgggtggggaggttaaatctttgtcg
gagaaagtagacactatttctcaagatcttgtgagggaagtgtctgcactgaacaataaa
gaagacactctcaaaagtgaaaaagaaaatgctgaaaagattgttaataatattgaagat
ttgaagcattctgtggaagagaaggcctctgctgttagaaaggctgaagaaggggcatct
gatctgaaaaagaggtttgaggaacttactaagagtttggaggagtatgaaaatgattac
cagggtgtattagctggcaagagcaatggaaatgaggagaaatgccttgaagatcaacta
ggtgatgccaaggtagctgttggaagtgctgaaacagaattgaaacagttgaaaacaaaa
ataagccactgtgagaaggagctgaaagagaaaagacgtcagttaatgtcaaaacgtgaa
gaagctgtttctgtagagaaagagcttaaggctagaacaagtgatgtggaaaatgttaag
aaggcattagagtctcttccatataaagagggacagatggaggcattacaaaaggatcgt
gcatctgagttggagctggtgcagaagttgaaggatgaaatacgcaatctgtcagcacaa
ttagcaaatgttgagttcacatatcgtgaccctatgaggaattttgataggtcaaaggta
aaaggtgtggtggcaaagcttatcaaagtaagggatagctccacgatgactgccttagag
gttactgctggtggaaagttgtttaatgttgttgtagacacagaaaatactgggaaacaa
ctgcttcagaatggtgatcttcgaagaagagtgacaattatacctttgaacaaaatacaa
tcccacgttgttcccccaagggttcaacattctgctgttagattggtaggcaatgataat
gcagaactggctctttccttggttggttatgaggaggagttgaagactgctatggaatat
gtatttggttcaacctttgtttgcaagaccgttgatgctgccaaggaggttgcttttaat
agggaaattcgcacccgaagtgtcactcttgaaggggatatatttcagccaagtggtctt
ttgactggtggaagccgcaagggtggtggtgatttgctaaggcaacttcatcatttggca
gaggctgaatcaaaactttatgcacatcagaaaatgttgtctgaaattgaagcaaagatt
gcacaactcatgcctcttcagaaaaagttcaccggccttaaaacacagttggagcttaaa
tcatatgacctttctttatttcagggcagggctgagcaaaatgagcatcataagcttggt
gaattagtgaagaaaatcgagttggagcttgaagaagcaaaatctgcggctaaggaaaag
caacttgtatatgaaaactgtgtaaatacagtttcattgcttgagaaatctatcaaagaa
catggtgataatcgggagggcagactcaaggatttggagaaaaagattaaggcagtaaaa
gctcaaatgcagtcatcttcaaaagctgtaaaggggcatgaaaatgaaaaggagagactt
gttatggaaatggaagctgttgtacaggaacgtgcctccttggaggctcaactagtttct
ttgagaacacaaattgacagtctcactgctgaattagaggaacaaaaggccaaggttgct
gccactaggaataatcatgatcaagctcaatccaaactcaatttgattcgacagaagatg
aaggaatgtgattcccaaattagttgtattcttaaagaccagcagaaacttcaacataaa
cttagtgagactaatcttgagaggaagaagatggaaaatgaggtcaaacgaatggagatg
gaacagaaagattgctctacaaaggtagacaagcttattgagaagcatgcttggattgca
cctgagaaacagctatttggaagaagtgggactgattatgattttgcatctcgtgatcct
attaaggcaagggaagaacttgagagactgcaggtggaacaatctggccttgagaaaagg
gtgaacaagaaagttatggcaatgtttgagaaagcagaagatgagtacaatgacttgatg
tccaagaaaaacatcattgagaatgacaagtccaaaatcaagaaggtcattgaagagcta
gatgagaagaagaaggaaacactaaaagttacttgggtaaaagttaacagtgactttgga
tccatcttttctaccctattgcctggaaccatggcaaaactagagcctcctgaaggatgc
agcttccttgatggtcttgaggttcgtgttgcatttggatctgtttggaaacaatccctg
tcagaactcagtggaggccaacgatctctacttgcactttctctaatcttggcactgcta
ctctttaaaccagctccgctttacatattggatgaggttgatgcagctcttgatctaagc
cacacgcagaacatagggagaatgataaaaactcactttccacactcccagtttattgtg
gtctcattgaaagaaggcatgttcaataatgctaatgttcttttccgaacaaaatttgtg
gacggtgtttctactgttcaaaggacagttgcagctaaatag
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