Quercus lobata (valley oak): 115959844
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Entry
115959844 CDS
T07350
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115959844
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115959844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
HEAT_GCN1
HEAT_EZ
TPR_Trm732_C
HEAT_2
HEAT_MROH2B_C
HEAT_GCN1_C
CLASP_N
Motif
Other DBs
NCBI-GeneID:
115959844
NCBI-ProteinID:
XP_030934313
LinkDB
All DBs
Position
9:complement(44735475..44774806)
Genome browser
AA seq
2058 aa
AA seq
DB search
MAQQSSRLHRLLTLLDAGSTQATRFTAARQIGDIAKSHPQDLTSLLKKVSQYLHSKNWDT
RVAAAHAIGAIAQNVKHTSLSELFACVENKMLEAEISADAEYVLTWPFFNSKIIGSSFKS
FDINKVLEFGALLASGGQEYDIVSDSMKNPRERLALQKQNLRRRLGLDVCEQFMDVSDMI
RDEDLIVQKVNAFGNVIDQRVYMSSSVHNIQQLVANMVPSVISKRPSARELNLLKRKAKI
NSKDQPKCWSEDGDTEASFAQNVTTPKGQCPDSSSCDKPFMDVNNDEDSLEHDGDGRWPF
RSFFEQLILDIFDPVWEIRHGSVMALREILTHQGASAGVFMPDLSWDSALFVELEDKGIS
NTMKREREIDLNMQVSSDGLQLDLKKPKFEDVSSSTMANIVSSSEVGNFDVCMKVDHGWN
LPSGLDNGQLNVTPVKVEPESFLDGACYSCEDAADTAEMKGYAEDKVSIGKADLLKNIPE
SCELMNFVKLARHSWLKNCEFLQECAIRLLCVLSLDRFGDYVSDQVVAPVRETCAQALGA
VFKYMHPTLVHESLNILLKMQCRPEWEIRHGSLLGIKYLVAVRQEMLHDLLSSILPACKT
GLEDPDDDVRAVAADALIPTAVAIVALEDHVLHPIVMLLWDILLDLDDLSPSTSSVMNLL
AEIYSQEEMIPKMFGALTLKENEEFDLNEVGCGDDAGGIISRENPYMLSTLAPRLWPFMR
HSITSVRYSAIRTLERLLEAGSKRNIPEPYNTSFWPSFILGDTLRIVYQNLLLESNEEIL
QCSMRVWRLLLQCPVGDLENAARSYMSSWIELATTPYGSALDATKMFWPVALPRKSHFRA
AAKMRAVKLESESCRNVVLESAAAIVPQERNVDVSANLVKVIVGADVEMSVTNTRVVTAS
ALGIFASKLHLGSMQNVIDPLWNALSSSSGVQRQVASMVLISWFKEIESSDGLGISVVAP
NVPSHLKEWLLDLLACSNPAFPTKDSLRPYAELSRTYSKMRGEATQLLRAIESPGMFKDL
LTTIRIDLESLSADDAINFASKVPTLVNDNVVSESLGAQIVDDVESLKQRLLTTSGYLKC
VQSNLHVTVSALVAAAVVWMSELPARLNPIILPLMASIKREQEEILQQKAAAALAELIFH
CISRRPSPNDKLIKNICSLTCMDPCETPQAGVISSMEVIDDQGLLSFGTSIGKQKSKVHM
LAGSEDRSRVEGFISRRGSELALRHICEKFGASLFERLPKLWDCLTEVLKPSNTEGVSPA
DENQVMLAIESIKDPQILINNIQVVRSIAPMLNEVLKPKLLTLLPSIFKCVCHSHIAVRL
AASRCITSMAKSMTKDVMGAVIKNAIPMLGDMTSVHTRQGAGMLISLLVQGLGVELVPYA
PLLVVPLLKCMSDSDQSVRQSVTHSFAALVPLLPLARGLPPPDAVNEDLSRNAEDARFLE
QLLDNSHIDDYKLHTELKMTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV
ASDIVEHRTLNIGDDLPPSLIVCPSTLVGHWAFEIEKYIDDSVVSTLQYVGSVQERISLR
GHFNKHNVVITSYDVVRRDIDYLGHLLWNYCILDEGHIIKNAKSKITLAVKQLKAQHRLI
LSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQAMYGKPLLAARDSKCSAKDAEAGVLAME
ALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYERFSGANVRQEISSIVKQ
DDSADKGEGGSSTKASSHIFQALQYLLKLCGHPLLAIGEKVPESLKYLLSELLPANSDII
SELHRLHHSPKLVALQEILEECGIGADASSSEGTIAVGQHRVLIFAQHKAFLDIIERDLF
HTHMKNSVTYLRLDGSVESEKRFDIVKTFNSDPTIDALLLTTHVGGLGLNLTSADTLIFM
EHDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTVEEKVMSLQRFKVSVANAVINAENA
SMKTMNTDQLLDLFASVEPSNKGASVPKNSDRNVDVDTKLVGSGKGLKAILGGLEELWDH
SQYTEEYNLNQFLAKLKG
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacagtcatctcgccttcatcgcctgctcactctcttggatgctggttcaacg
caagcaacaagatttacagctgctcgtcaaataggggatattgccaaatcgcatcctcaa
gacttaacttctcttctgaagaaggtttctcaatatcttcatagtaaaaactgggataca
agggttgctgcagctcatgctattggggctattgctcagaatgttaagcacacatcgttg
tctgaactttttgcttgtgttgaaaataaaatgttggaggcggagatctctgctgatgct
gaatatgtgctgacatggcctttttttaattctaaaattataggctcctcatttaaaagc
tttgatatcaacaaggtgcttgagtttggtgctttattggcatctgggggacaggagtat
gatattgtgagtgacagtatgaagaacccgagagagcgtttggctctccagaaacaaaat
cttcgtcgccgtttaggtttggatgtttgtgagcagttcatggatgtcagtgatatgata
agagatgaggaccttattgtgcagaaagttaacgcttttggcaatgtgatagaccaaaga
gtttacatgtcgtcatctgtacataatatccagcaactagtagcaaatatggttcctagt
gttatatctaagaggccaagtgcaagggaattgaatctcctaaaacgaaaagcaaaaata
aattcgaaagaccaaccaaagtgttggtctgaggatggagatactgaggcatcgtttgct
caaaatgtgacaacaccaaagggccaatgtcctgattcatcaagttgtgataagccattt
atggatgttaataatgacgaagacagcttggagcatgatggagatgggcggtggcccttc
cgtagtttttttgagcaactcatccttgatatttttgatccagtttgggagattcgccat
ggtagtgtcatggccttgagggaaattttaactcatcaaggtgcatctgctggggtgttt
atgcctgacttgagctgggatagtgcactttttgttgaactagaagataaaggtatatca
aatacaatgaagagagagagagagattgatttgaatatgcaagtttcatcagatgggctt
cagctggatctgaagaagcctaagtttgaagatgtgtcatcctcaacaatggccaatatt
gtctcttccagtgaggttggcaattttgatgtctgcatgaaggttgatcatgggtggaat
ttgccttctgggctagataatggccagttgaatgttactcctgttaaggtggagccagaa
tcttttcttgatggtgcctgctattcgtgtgaagatgctgctgataccgctgagatgaag
ggttatgctgaggataaggtttccattggaaaagcagatctgctgaaaaatattcctgaa
agttgtgagctgatgaacttcgttaaactagctaggcattcttggctaaaaaactgtgaa
tttcttcaagaatgtgcaattcgtctattgtgtgtgttgtctcttgaccgatttggtgat
tatgtatcggatcaggttgttgctcctgtacgggagacctgcgctcaagcattaggtgct
gtgtttaagtacatgcatcccacattagttcatgaaagcttaaatatattgctgaaaatg
cagtgtagaccagagtgggaaattcgtcatgggagtcttttgggtatcaagtatttggtt
gctgtgcggcaggagatgcttcatgacttgctttctagcattctccctgcatgtaaaact
gggttggaggaccctgatgatgatgttcgagcagttgctgcagatgctttaatacccaca
gcggttgctattgttgctctagaggatcatgtgttacatccaattgtgatgctactttgg
gatatattacttgatttggatgatttaagcccatccaccagcagtgtaatgaatcttttg
gcggaaatctattcccaggaagagatgatacctaagatgtttggagctttgacgttgaaa
gagaatgaggagtttgatctaaatgaagttggttgtggtgatgatgctggagggataatt
tcacgggaaaatccttatatgttatccacactggcaccacggttatggccatttatgagg
catagtatcacatcagtccgttattcagctattcgcactttggagcggttgcttgaagca
ggcagcaaaaggaatattcctgagccttacaatacttcattttggccttcttttattttg
ggtgatacccttaggattgtttatcagaatttgctgctggaatcaaatgaggaaatcttg
cagtgctcaatgagggtttggaggcttcttctccagtgcccagtgggggacttggaaaat
gctgctaggtcatatatgtcttcttggatagaacttgcaacaactccatatggttcagca
ttagatgctacaaaaatgttttggcctgttgcccttccacgaaagagtcattttagagct
gctgctaaaatgagagccgtgaaacttgaaagcgagtcttgtagaaatgttgtcttggaa
tctgcagctgccattgttccacaagaaagaaatgtagatgtttctgccaatctagttaag
gtaattgttggtgctgacgtggaaatgtcagtaactaataccagagtggttacggcatca
gcattggggatttttgcttctaaattgcatctggggtctatgcaaaatgtaattgatcca
ctttggaatgcactttcctcttcatctggggtccaaagacaggtggcatctatggttctt
atttcatggtttaaagaaatcgagagcagtgatggcttaggaatctctgtagttgcacct
aatgttcccagtcatctcaaagaatggctgttggatttgttggcatgctcaaaccctgca
ttccctacaaaggattcacttcgtccttatgctgagctttcaagaacatattcgaagatg
cgtggtgaggctacccagttattacgtgctattgagtcacctggcatgtttaaggatttg
ttgactaccatcagaattgacttggaaagcttgagtgcagatgatgcaattaattttgca
tcaaaagttccaacgttggttaatgataatgttgttagtgaatctttgggagcgcagatt
gttgatgatgtggagtcattaaaacaacgacttttgacgacttcggggtatttaaaatgt
gttcagagtaatctgcatgttactgtgtctgccttagttgctgctgcagttgtctggatg
tcagagcttcctgcacgactcaatccaattattttgcctttgatggcttcaataaaaaga
gagcaggaggaaatactgcagcagaaggctgctgcagcactggcggagcttatttttcat
tgtatttcacgtaggcctagcccaaatgataagttaatcaagaatatatgtagtttaacg
tgcatggatccttgtgagacacctcaagcaggagtcatcagttccatggaggtaatcgat
gatcagggtctcctatcctttggaactagtataggtaaacagaagtcaaaggtacacatg
ctggctggaagtgaagatcggtcaagggttgagggctttatcagcagacgtgggtctgaa
cttgcattgaggcatatctgtgagaagtttggtgcttcattatttgagaggcttcctaaa
ctttgggactgccttaccgaagttcttaagccttccaatactgagggtgtgagtcctgca
gatgaaaatcaagtcatgctagctattgaatccattaaggatccccagatcttgataaat
aatattcaggtagtacgttccattgctcctatgctgaatgaggttttgaaaccaaaacta
ctcacccttctgccttccattttcaaatgtgtttgccattcccacattgctgttagatta
gctgcttctaggtgcatcacttcaatggccaaatcaatgactaaagatgtgatgggagct
gttattaaaaatgccattcccatgttaggggatatgacatctgtccatacccgacagggt
gctggcatgctcattagtttgcttgttcagggactgggtgtggaattggtcccttacgct
cctttgttagttgttcctcttctgaagtgtatgagcgacagtgatcagtctgtcaggcag
agtgtgacacatagttttgctgcccttgtgccacttcttccattagcacgtggccttccc
ccacctgatgctgtgaatgaagatttatctagaaatgctgaagatgcacggtttctggag
caactacttgacaactcccatattgatgattacaagctccatactgaactgaaaatgaca
ttgagaaggtatcaacaggaaggtataaattggttggcatttttaaaacgattcaagctt
catggaatcttatgtgatgatatgggccttggtaagacacttcaagcatctgcaattgtg
gcatctgacatagttgagcatcgcactctgaatatcggtgatgatcttccaccatcttta
atagtttgtccatcgacccttgttggacactgggcctttgagatagagaagtatattgat
gattctgtagtatctactctccaatatgttggttctgttcaagagcgcatttctcttcgg
ggacattttaataagcataatgttgtgataacatcatatgatgtggttcgtagagatatt
gattatcttggacatcttctatggaattattgtattttagacgaaggtcacatcatcaag
aatgcaaaatctaaaattacactcgcagtaaagcagttgaaagcccagcaccgccttata
ctgagtggaacaccaatccagaacaacatcatggatttatggtctctctttgatttccta
atgccggggtttcttggaacggagagacagttccaagccatgtatggaaaaccactgcta
gcagctagagattctaaatgttctgccaaggatgctgaagcaggggtacttgctatggaa
gcactgcacaaacaggtgatgccattccttctccgtcgaacaaaagatgaagtcctgtct
gatctgccagagaaaattattcaggacagatactgtgacttgagccctgtgcaattaaaa
ctatatgaacgattttcaggggcaaatgtaaggcaagaaatctcaagtattgtaaaacaa
gatgattccgcagataagggcgaaggaggtagttcaaccaaagcatcttcccatattttc
caggcacttcagtacttgctaaaactttgtggtcatccattgcttgccatcggtgaaaag
gttccagagtcattgaaataccttttgtcagaactcctacctgcaaattcagacattatt
tcagaacttcatagactgcatcactctcccaagttagttgctcttcaggagattcttgaa
gagtgtgggataggtgctgatgcttcaagttctgaaggtaccattgcagtagggcagcac
agagttttgatatttgcccagcataaagcctttctagacataattgaaagagatttgttt
cacactcatatgaagaacagtgtcacatatctgcggttggatggatcagttgaatctgaa
aaacgttttgacattgttaaaacatttaattctgaccctactattgatgccctactactt
acaacacatgttggtgggcttggtttgaacctaacatctgcagacaccctgattttcatg
gagcatgattggaatccaatgcgagatcatcaggcaatggacagagcacacaggttaggt
cagcggaaagtcgtgaatgtccatcgactcataatgcgtggcactgtggaagagaaagtt
atgagcctccaaaggttcaaagtttcagttgctaatgctgtcattaatgcagagaacgct
agtatgaaaactatgaacacagaccaattgcttgatctatttgcatcagtagaaccctct
aacaagggagcttctgtaccgaagaattcagatagaaatgttgacgtagatacaaaattg
gtgggcagtggaaaagggttaaaagccatccttggtggactcgaggaactctgggatcat
tcacagtataccgaagaatacaatttgaaccaattcttggcaaagcttaaaggctaa
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integrated database retrieval system
