Quercus lobata (valley oak): 115959960
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Entry
115959960 CDS
T07350
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115959960
Transcription machinery [BR:
qlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
115959960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
115959960
NCBI-ProteinID:
XP_030934504
UniProt:
A0A7N2MHK2
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Position
9:complement(10877522..10883108)
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AA seq
517 aa
AA seq
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MGVVTVSSSASRTPLGLVAKFSGQRSTLKRPLIVAFKVDKPNSTASGAPQAQIPLPIEIH
KDHKKRLVKANKPLRRVKAVLTDEASPCTLEVDYNEAAAQLENIYKLSPTTDTSDVENVD
GTRKSRGRRRKNIEGDSKAENRTGNSVIKNRIKKVQRLGLEKRIALKKNKENEVVPLLRK
RKVIKNENVRIEKLVREYSASTDLVGLDWRKMKIPPVLPSSEHAWLFKLMQPMKALLEVK
DNLQKDLGREPTEGELAEATNMNVVQVRKHMEVGRAARNKLIKHNLRLILFVIKKYFQEF
ANGPKFQDLCQAGVKGLITGIDRFQPKRKFRLSTYTLFWIRHAIIRSMTLSSFTRVSFGL
ESVRLEIQRAKLELLFELHRLPTKEEIIKKVGISPERYHEVLKASKPVLSLHSRHATTQE
EYINGIPDVDGVGADNWKQPALQRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA
GNLNISREMVRKHEVKAFMKLKHPARVDYLRQHISIN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagcttctcgaactccattaggactggttgcaaaa
ttctcaggtcaacgctctacgttgaaaagacccttgatagtagcattcaaagtagataaa
cccaatagcacagcatcaggtgcacctcaggcgcaaatccctctgcccatagaaattcat
aaggatcacaaaaagagactagtaaaagctaataaacctttgagaagagtaaaagctgtc
cttacagatgaagcttctccgtgtaccttggaagtggattacaatgaagccgccgcccaa
cttgaaaacatatacaagcttagcccaacaacggatacttctgatgtggaaaatgtagat
ggcacaagaaaaagccgaggaaggaggaggaagaatattgaaggtgattcaaaagcagaa
aatagaactggtaatagtgttatcaagaaccgaataaagaaggttcagagattgggtctt
gagaaaaggattgcattgaaaaagaacaaagaaaatgaagtggttcctctattacggaag
agaaaagttattaagaatgaaaatgtgaggattgagaagcttgtaagggagtactcagct
tctactgatttggtcggtttggactggagaaagatgaagatacctccagttcttccttct
tcagagcatgcttggttgttcaagttgatgcaaccaatgaaggcactccttgaagtaaaa
gataatttgcaaaaagacttgggaagagaaccaacagaaggcgaattagctgaagcaaca
aatatgaacgtggttcaagtacgaaaacacatggaggttggtcgagctgcaagaaataag
cttattaagcacaatctccgtctcattttgtttgtaataaaaaaatattttcaagaattt
gcaaatggaccaaaatttcaagacctttgtcaggcgggagtgaagggactcattacagga
attgatcgttttcaaccaaaaaggaaattccggctctcaacttatactctcttttggatc
aggcatgccattatacgctccatgacactctcaagctttactcgtgtttcatttggcctt
gaatcagttagattggaaatccagagagccaaacttgagttgttgtttgagcttcataga
ttaccaacaaaggaagagataataaaaaaagtggggatctcgcccgagaggtatcatgaa
gttctgaaggcctcaaaacctgttttgtctctacattcaaggcatgcaaccacacaagag
gagtacataaatgggatcccggatgttgacggtgttggagctgataactggaagcaacct
gctcttcaaaggcttgctcttgacgatgtgcttgattccttgaagcccaaggagagcttg
gttatcagacagagatatggacttgatggtaaaggtgatagaacattgggagagattgct
ggcaacttaaatatttcaagagaaatggttcggaagcatgaagttaaggctttcatgaag
cttaagcatccagctcgagtggattatcttcgccaacatataagcataaactga
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