Quercus lobata (valley oak): 115960029
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Entry
115960029 CDS
T07350
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115960029
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115960029
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF3737
Motif
Other DBs
NCBI-GeneID:
115960029
NCBI-ProteinID:
XP_030934608
UniProt:
A0A7N2KR57
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Position
1:51975886..51978002
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AA seq
391 aa
AA seq
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MAKFSRLFYTLFFILSVSHISRANIVYNVINFGAKPDGKTDSTPAFLNAWSAACASSDSS
TINVPKGRYLIGSLAFKGECKSSDIAFQIDGTLVAPADYRVLGQASNWLSFEGVSGVTII
GGALDAKGSGLWACKAAGTNCPSGATALSFTNSYNIRINGLLSLNSQMYHIVFNGCQNVH
VERIKIIASGDSPNTDGIHVQLSSNVVIVNSTIKTGDDCISIGPGTKNLWIEHIKCGPGH
GISIGSLAKDMEEAGVQNVTVSKAIFIGTQNGLRIKSWARPSSGFVQRVRFLGAVMQNVQ
NPIVIDQNYCPHNINCPGQVSGVKISDVLYQDIRGTSATQIAIKFDCSAKNPCTGIRIEN
VNLIYPNQVAQSFCTNAIGKTLGSVQPNGCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttttcaaggctcttttacacccttttcttcattctttctgtctcccacata
tcacgtgcaaatatagtttacaatgtcataaattttggagctaaaccagatggcaaaaca
gactcaaccccagcatttcttaatgcatggtctgcagcttgtgcttcctcggactcttca
accataaatgtgcctaagggaaggtacttgattggctccttggccttcaaaggtgaatgc
aaaagctctgatatcgcattccagattgatggaactctagtggctccagcagattatcgt
gttcttggccaagctagtaattggctcagctttgaaggtgttagcggagttaccattatt
ggaggagcactcgatgccaaaggatcaggcttgtgggcttgcaaagctgctggcactaac
tgtcccagcggagccacggctttaagttttaccaattcttacaacattaggatcaacggg
ttattgtcactaaatagtcagatgtaccatattgtattcaacggctgccagaatgtgcat
gttgaaagaatcaaaattatagcctccggggacagccccaacacagacggcatccatgtt
caactatcaagtaatgttgtaatagttaactccaccatcaaaactggggatgattgcatc
tccattggccctggcaccaagaacttgtggattgaacacatcaaatgcggccccggtcac
ggcattagcatagggagccttgcgaaggacatggaagaggcaggggtacaaaatgtgacg
gtcagtaaagccatttttattggtacccaaaatggactaaggataaagtcttgggccaga
cccagctctggatttgtccaacgggttcgctttttaggagctgttatgcaaaatgtccaa
aatcctatagttatagaccaaaattactgtcctcacaatatcaattgtcctggtcaggta
tctggagtaaaaatcagtgatgtgttataccaggatatcagaggaacatcagcaacacaa
attgctataaaatttgattgtagtgccaagaacccttgcactggtataagaattgaaaat
gtcaatttgatttatccaaatcaagtagctcaatcgttttgtacaaatgcaattgggaag
accctcggttcagtccaaccaaatggttgtttgtaa
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