Quercus lobata (valley oak): 115960163
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Entry
115960163 CDS
T07350
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115960163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115960163
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
115960163
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115960163
Multi subunit type E3
ERAD complex
115960163
LMBR1L-GP78-UBAC2 complex
115960163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_4
zf-RING_16
E3_UbLigase_EDD
zf-RING_Vps41
PHD
zf-HC5HC2H
RINGv
Motif
Other DBs
NCBI-GeneID:
115960163
NCBI-ProteinID:
XP_030934776
UniProt:
A0A7N2MKN6
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Position
9:complement(19877162..19886131)
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AA seq
590 aa
AA seq
DB search
MGVRYIAVSAASTVLSFVFLQFWTELSLDNLKSDGLIAENYIHSENASRVIELLSGSYAT
IGLLTNFVLNVFVLLVLCLKTIFFVELYPPETRKLLERLVNYVIYKGTFLPLVIPPTIFH
AGLWSVWLAVLCSLKMFQALARDRLERLNASPSATPWTYFRVYSVLLLVLSVDFFWIRLC
LVIYRMLGSSMFLLLFFEPLSIAFETLQAILVHGFQLLDIWLHSAGNSANCQRFKFLDTS
AAGSLWEWKGILIRNVGFSLDMATLLMALGHYVHIWWLHGMAFHLVDAVLFLNIRVNICA
LLGAMFKRIKGFIKLRKALGALHAALPDATTEELQAYDDECAICREPMAKAKRLHCKHLF
HLACLRSWLDQGLSETYSCPTCRKPLFIGRPENEVTPRTGEVLTDEQLARQIGAGLDRQN
NSEHTLPTGVFPNQTQNPIEGGPWRTAGLESSWLNAWPSQGVDGAGPSTAIRSVGLGRVQ
MMMRHLASVGETYAQTTLEDSAWSLWPMNPSQAAATGGPIPHAGGGRYTGGTGGLHMRTA
SLPANDNIANILAMAETVREVLPHMPDDIILQDLQRTNSVSVTVNNLLQM
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcgctacatagccgtgtcagcggcgtctacggtgctcagctttgtctttctt
caattctggactgagttgtctttagataatcttaaatcggatggactaatagctgagaat
tatattcattcggagaatgcaagccgtgtcatcgagctgctctcgggttcttatgctacc
attggactgctgacaaattttgtgctcaatgtatttgttttactagttctatgtctaaag
accatattttttgtggagttgtatcctcctgagactcggaaattgttggaacgtcttgtc
aattatgttatttataaggggacgtttctaccactggttattccaccaacaatatttcat
gcaggcttgtggtcagtctggttggctgttctatgttctttaaagatgtttcaagctttg
gctagagatcgacttgaacgtttgaacgcatctccttctgctacaccttggacatatttt
cgtgtatattcagtcttattgttggtcctctctgttgactttttttggatcaggctgtgt
ctggtaatatatagaatgctgggttcatcgatgtttctgttgttattctttgagcctctc
agcattgcttttgagacgctgcaggccattttagttcacggatttcagttgcttgatata
tggctccattcagcagggaacagtgccaattgccaaaggttcaaatttttagatacatca
gcagcaggttcattgtgggaatggaagggcattcttattcggaatgtggggttttcccta
gacatggcaacattgttaatggcacttggtcattatgtgcatatttggtggcttcatggc
atggcattccatctcgtggatgcagtcctttttctaaatatacgtgtaaatatttgtgcc
ttgctaggtgctatgttcaagcgtataaaaggattcatcaaattgagaaaagctttaggt
gctcttcatgctgctcttcctgacgcaactactgaagagctacaagcttatgatgatgaa
tgtgccatctgtcgggaacctatggccaaggctaaaaggctgcactgcaaacatcttttt
catcttgcatgcttgagatcttggttggatcaaggtttgagtgagacttattcatgtccc
acttgtcgaaaaccactttttattggcagacctgaaaatgaagttactcctcgtactggg
gaggttttgactgatgagcagcttgcccgtcaaataggtgctggacttgatcggcaaaac
aattctgaacataccctacctactggagtattccccaatcagacacagaaccctatagaa
ggtggtccttggaggactgcaggactggaatcaagttggttaaatgcttggccaagccag
ggtgttgatggggctggaccctctactgcaatcagatcagttggattagggagagttcag
atgatgatgaggcatctcgcttctgtaggagaaacctatgcacagacaacccttgaagat
tctgcttggagcctttggcctatgaatccctctcaggctgccgcaactggtggacccatc
cctcatgctggtggtggcagatacactggaggcactggtggtttacatatgaggactgcc
tcactccctgcaaatgataacatagcgaacattcttgccatggctgagacagtacgggag
gttttgccacacatgcctgatgacataattttgcaggacttgcagcgaacaaattctgtc
tctgttaccgttaataatcttcttcaaatgtga
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