Quercus lobata (valley oak): 115960165
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Entry
115960165 CDS
T07350
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115960165
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115960165
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
115960165
NCBI-ProteinID:
XP_030934779
UniProt:
A0A7N2MFT2
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Position
9:complement(10718617..10726524)
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AA seq
448 aa
AA seq
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MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPSYL
LPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSGQVIMGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTTPMVNSQPSILGQQPTS
VMGSAVQYSGAPFTPSQEQPGMPQQPSAGWGPGVPPMPQSMPMQMHNNPYMPPGTMPPQA
APGMMQSPMQSGMPQSSMLPRYGSGQMQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtatccagtcagccacaatttcgttacacccaacctccatcaaaggtgctc
catttgcgaaacttgccatgggagtgcacagaggaggaactgattgaacttgggaagcca
tttggtaaagttgtgaacacaaagtgcaatgttggagcaaaccgaaatcaggcttttatt
gaatttgctgatttaaatcaagctattgctatgatatcatattatgcctcatcctcagag
cctgctcaagtgcgtggaaaaactgtctacctacagtattcaaataggcaagaaatagtg
aacaacaaaactactgcagatgttgctggaaatgtacttttggtaacaatagagggtgca
gatgcacgccttgttagcattgatgttttacacctggttttttctgcttttggatttgtg
cataagattactacctttgagaagacagctggattccaggcgctggtacaattttcagat
acagagactgcctcttctgcaaagaatgccctagatggaagaagcattcctagttatctt
ctccctgagcatttggggccatgtacccttaggatcacgtattctgcacacacagatttg
agtgtgaaattccagagccaccgtagcagggactacactaatccttaccttcctgttgct
ccatcagccatagatggaagtgggcaggtaattatgggtttggatgggaaaaagctagaa
ccagagagtaacgttcttcttgcatctattgagaatatgcaatacgctgtcaccttggac
gttttacacatggtgttttctgcttttgggcctgtacaaaagattgccatgtttgataag
aatgggggtgtgcaggctttgattcagtaccctgatgttcaaactgctgttgttgctaag
gaagccctggaaggacactgcatctacgatggagggttttgcaagcttcacatctcatat
tcacgccatactgatctcagcattaaggtcaacaatgatcggagcagagactatacaatc
cctaacaccacccccatggtgaactcccagccctcaattctggggcaacagccgacttca
gtgatgggctctgctgttcaatacagtggggctccttttactccaagtcaggagcagccc
gggatgcctcaacaaccttcagctgggtggggcccgggtgttccaccaatgcctcagtcc
atgccgatgcaaatgcataataatccttacatgccacctgggacaatgccacctcaagct
gccccaggaatgatgcagtctcctatgcagagtggcatgcctcaatcatcaatgttgccc
cgttatggatctgggcagatgcaatag
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