KEGG   Quercus lobata (valley oak): 115960202
Entry
115960202         CDS       T07350                                 
Name
(RefSeq) F-box protein SKP2B isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115960202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115960202
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115960202
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 F-box-like F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 115960202
NCBI-ProteinID: XP_030934835
UniProt: A0A7N2MJJ0
LinkDB
Position
9:complement(29491676..29497053)
AA seq 374 aa
MVGKDNLKTEDLNLCFEKLMMLGGSGFGKGGGKMEGGVINEWKDIPMELLLQILSLVDDQ
TVFAAFGVCRGWRDAIFLGLTHLSLIWCNKNMNNLVLSLVPKFTKLQSLTLRQEQKPLLE
DNAVETIANCCHDLQILDLSKSFKLIDRSLYALAHGCPNLTKLNISGCSAFSDDALAFLV
RFCRRLKSLNLCGCVRAASDSALQAIGLYCSQLQILNLGWCENASDVGVMSLAHGCPDLR
SVDLCGCVLITDDSVIALANSCHHLRSLGLYYCQNITDRAMYSLAHSRVNNKTTMWEPMK
GMNDEEGLRTLNISQCTALTPPAVQAVCDSFPSLHTCSGRHSLIMSGCLNLMSVHCACAV
QAHRTATTFLHPAH
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggtgggtaaagacaacttgaagactgaggacttgaacttgtgctttgagaagcttatg
atgcttggaggaagtggttttggtaaaggaggagggaaaatggaaggtggggttatcaat
gagtggaaggatattcctatggagctcttgttgcaaattttatctcttgtggatgatcag
acggtgtttgcggcatttggagtgtgtcgtggctggagagatgctattttcctgggcctt
acccatctgtctctcatatggtgcaacaagaacatgaacaacttggttctatctcttgtt
ccaaagttcacgaaattgcagtctttgacactgcgccaagagcaaaaaccactgcttgag
gataatgctgttgaaactattgcaaattgctgtcatgatctgcagatcctggacctcagc
aaaagcttcaagcttattgaccgctcactatatgccctggctcatggttgccctaacctt
acgaaactcaacatcagtgggtgttcagcattcagtgacgatgctcttgcatttctagtt
aggttttgcagaaggttaaaatcattaaatctttgtggatgtgtcagagctgcatctgac
agtgcattgcaggctattggactttactgcagtcagttgcagattttaaatcttggatgg
tgcgagaatgcaagtgacgtgggagtgatgagcttagcacatggatgccctgatctcaga
agtgttgatttgtgtggctgtgtcctaataacagacgatagtgtgattgctcttgcaaac
agttgtcatcatctgagatcccttggcttatactactgtcagaacattacagacagagca
atgtactcattggcccacagccgagtgaataacaagactacaatgtgggaacccatgaaa
ggaatgaatgatgaggaagggcttagaacacttaacatcagccagtgcacggcactcact
ccccccgcggttcaggcagtttgcgattcatttccgtctcttcacacttgctcaggaagg
cactcacttatcatgagtggctgtttgaacttgatgtctgtgcactgtgcctgtgcagtc
caagcacaccgcacagccaccacttttcttcacccagctcattga

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