Quercus lobata (valley oak): 115960202
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Entry
115960202 CDS
T07350
Name
(RefSeq) F-box protein SKP2B isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115960202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115960202
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115960202
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
115960202
NCBI-ProteinID:
XP_030934835
UniProt:
A0A7N2MJJ0
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Position
9:complement(29491676..29497053)
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AA seq
374 aa
AA seq
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MVGKDNLKTEDLNLCFEKLMMLGGSGFGKGGGKMEGGVINEWKDIPMELLLQILSLVDDQ
TVFAAFGVCRGWRDAIFLGLTHLSLIWCNKNMNNLVLSLVPKFTKLQSLTLRQEQKPLLE
DNAVETIANCCHDLQILDLSKSFKLIDRSLYALAHGCPNLTKLNISGCSAFSDDALAFLV
RFCRRLKSLNLCGCVRAASDSALQAIGLYCSQLQILNLGWCENASDVGVMSLAHGCPDLR
SVDLCGCVLITDDSVIALANSCHHLRSLGLYYCQNITDRAMYSLAHSRVNNKTTMWEPMK
GMNDEEGLRTLNISQCTALTPPAVQAVCDSFPSLHTCSGRHSLIMSGCLNLMSVHCACAV
QAHRTATTFLHPAH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtaaagacaacttgaagactgaggacttgaacttgtgctttgagaagcttatg
atgcttggaggaagtggttttggtaaaggaggagggaaaatggaaggtggggttatcaat
gagtggaaggatattcctatggagctcttgttgcaaattttatctcttgtggatgatcag
acggtgtttgcggcatttggagtgtgtcgtggctggagagatgctattttcctgggcctt
acccatctgtctctcatatggtgcaacaagaacatgaacaacttggttctatctcttgtt
ccaaagttcacgaaattgcagtctttgacactgcgccaagagcaaaaaccactgcttgag
gataatgctgttgaaactattgcaaattgctgtcatgatctgcagatcctggacctcagc
aaaagcttcaagcttattgaccgctcactatatgccctggctcatggttgccctaacctt
acgaaactcaacatcagtgggtgttcagcattcagtgacgatgctcttgcatttctagtt
aggttttgcagaaggttaaaatcattaaatctttgtggatgtgtcagagctgcatctgac
agtgcattgcaggctattggactttactgcagtcagttgcagattttaaatcttggatgg
tgcgagaatgcaagtgacgtgggagtgatgagcttagcacatggatgccctgatctcaga
agtgttgatttgtgtggctgtgtcctaataacagacgatagtgtgattgctcttgcaaac
agttgtcatcatctgagatcccttggcttatactactgtcagaacattacagacagagca
atgtactcattggcccacagccgagtgaataacaagactacaatgtgggaacccatgaaa
ggaatgaatgatgaggaagggcttagaacacttaacatcagccagtgcacggcactcact
ccccccgcggttcaggcagtttgcgattcatttccgtctcttcacacttgctcaggaagg
cactcacttatcatgagtggctgtttgaacttgatgtctgtgcactgtgcctgtgcagtc
caagcacaccgcacagccaccacttttcttcacccagctcattga
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