Quercus lobata (valley oak): 115960263
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Entry
115960263 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115960263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115960263
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115960263
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115960263
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115960263
NCBI-ProteinID:
XP_030934918
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Position
9:9172742..9180334
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AA seq
350 aa
AA seq
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MDLDSIECVSSSDLDEDEIHHHQHPHQQLQHPHHHVLHPHLHSEFSSSNNKSRNASNNVV
NGNNNNANNIVGPTAITPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRC
PTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEATCNFRPYNCPYAG
SECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC
LHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHKKVR
DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacttggacagcatcgagtgcgtttcatcatcggatttggacgaggatgagatccac
catcatcaacatccacaccaacaacttcaacacccacatcaccacgttcttcatcctcat
ctccactctgaattctcttcctcaaacaacaagtcccgcaatgccagcaacaacgttgtt
aacggcaacaacaacaacgccaacaatattgtgggcccaacagctattactcccgccacc
agcgtccacgagctcctagaatgccctgtctgcaccaattccatgtaccctccaatccac
cagtgccacaatggacatacactgtgttctacctgtaaaacaagggtacaaaatcgatgc
cccacttgtagacaagagcttggagatattaggtgtttggccttggagaaggtggctgag
tcacttgaactgccctgcaagtattactccttgggatgcccagaaatatttccatactac
agtaagcttaaacatgaggcaacgtgcaacttcagaccatataattgtccgtatgctgga
tcagagtgctctgttgttggggatatccctttcctggttgcccatctgagggatgatcac
aaggtggacatgcacacaggatgcacatttaaccatcgctacgtgaagtctaatccccgg
gaagttgaaaatgccacttggatgctgacagtatttcattgttttggtcaatacttctgc
cttcactttgaagctttccagcttggcatggcccctgtttacatggcattcctccgtttc
atgggtgacgagaatgaggctcggaactatagttacagccttgaggtcggggcaaatggg
aggaaactcatatgggagggtaccccacgaagtattcgagatagccacaagaaggtcagg
gacagccatgatggtctcattatccaacgaaacatggctctcttcttctcgggtggggat
agaaaagagctgaagctgagagttactgggaggatatggaaggagcaacagaatccagat
gctggggtgtgcataccaaacctctgtagctga
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