Quercus lobata (valley oak): 115960469
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Entry
115960469 CDS
T07350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115960469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115960469
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115960469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115960469
NCBI-ProteinID:
XP_030935257
UniProt:
A0A7N2MLD2
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Position
9:complement(40971955..40976173)
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AA seq
441 aa
AA seq
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MDSDEGKLFIGGIAWDTSEETLTEYFTQYGQVTQAVIMREKPTGRPRGFGFVVFSDPSVL
DRVLQDRHTIDGRTVEAKRALSREEQQTSSRTGNFNTGRTSGGGGNFKTKKIFVGGLPSN
LAEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDTEDAVDRVLHKTFHDLNGKSV
EVKRALPKDANPGGGGRSGGYQGYGASGANTNTFDGRTDGSRYMQPQTAAGGFPPYSGYG
GAGYGYGANSGVGYGGYGSYGVSGYGTANTGFGGPMGAYGNPNAPNAGYGTGGPGAVKNT
WTNQTPSGYGTSGYGGGAGYGTAAWNAPGSGGAVSAPRGQSPSAASGYGNQGYGYGSYGG
SDGSYSGGYGATGGRAGSAPSSNAGGGAGGGEQHGMGGYMGSGYGDTNGNSGYSNAAWRS
DPSQATGGYGGGYGAAQSRQT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacgaaggaaagctattcataggaggcatagcatgggacaccagcgaagaa
accttgactgagtacttcacccagtacggtcaagtcacccaagccgttatcatgcgcgag
aaacccactggtcgccctcgtggttttggctttgttgtcttctctgacccttctgttctt
gaccgtgtcctccaggataggcacaccatcgatggccgcaccgtggaggcaaaaagggct
ctatcaagggaagaacagcaaacttcctctagaactggaaattttaacactggcagaacc
tctggagggggaggaaattttaagacaaaaaaaatatttgttggaggattgccttccaac
ctggcagaagatggatttcgtcagtattttgaaagttatggacaagtaactgatgtggta
ataatgtatgaccagaacactcaacggcctcgtggttttggtttcataacatttgacact
gaggatgcagttgatagagttcttcataagaccttccatgacttgaatggtaaatcagtc
gaggtaaaacgagcccttcccaaagatgcaaatccaggtggtgggggccgtagtgggggc
tatcaaggttatggggcctctggtgcaaatacaaatacgtttgatggtcgaacagatgga
agtagatatatgcagcctcaaactgctgcaggtggtttcccgccatattctggctatggt
ggagcaggttatggttatggtgctaatagtggagttggttatggtggttatggcagttat
ggtgttagtggttatggaactgcaaatactggatttggcggtcccatgggggcatatgga
aacccaaatgcccctaatgctggttatggaactggggggccaggtgcagtaaaaaatact
tggacaaatcaaactccttctgggtatggcacatcaggctatggtggaggtgctgggtat
ggaactgcagcctggaatgctccaggtagtggtggtgctgtttctgctccaaggggtcaa
tccccaagtgcagcttctgggtatgggaatcaaggctatggatatggtagttatggtgga
agtgacggttcttattctggtgggtatggggctacagggggacgtgctggaagtgcccca
agtagcaatgctggtggtggtgctggtggtggagagcaacatggaatgggtggttacatg
ggaagtggctatggcgacacaaatggaaattcggggtactccaatgcagcatggagatct
gacccttcacaagccactgggggttatggtggtggatacggtgctgctcagtccaggcag
acttaa
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