KEGG   Quercus lobata (valley oak): 115960488
Entry
115960488         CDS       T07350                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115960488
Spliceosome [BR:qlo03041]
 Complex B
  Other components
   Complex B specific factors
    115960488
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_IFT122_2nd PROPPIN Mala_s_1-like Beta-prop_WDR75_2nd Beta-prop_IP5PC_F zf_topless
Other DBs
NCBI-GeneID: 115960488
NCBI-ProteinID: XP_030935278
UniProt: A0A7N2MGL9
LinkDB
Position
9:complement(4401728..4414358)
AA seq 513 aa
MSFLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFIADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH
LLVRTYFDANEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMVLIGQALKWQQNQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTTLAHTMKFGTKNYPESAQFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADERFMMHEDPVFCADFSRDSEMLATGSKEGKIKVWRIRTGQCLR
RLEHAHSGCVTSIVFSRDGSQLLSTSFDNTARIHGLKSGKMLKEFRGHSSCVNDAIFTTD
GNRVITASSDCTVKVWDMKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNETS
SIYIMTLQGQVVKSFSSGKREGGDFVASCVSPKGDWIYCVGEDRNMYCFSYQSGKLDHLM
KVHEKGVTCVTHHPHRNLVATCSQDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgttcctcgaaatcgaagctcgagacgtgatcaagattgtgctccaattttgcaaa
gagaattctttgcaccaaacgttccagacgttacagagcgagtgccaggtttctttgaat
actgtggacagtgtggagacgtttattgctgatattaatagtgggaggtgggacgcaata
ctgcctcaagtgtctcagcttaagcttcccaggaataaattggaggatttgtatgagcag
attgtattagaaatgattgaacttcgagaattggatactgcacgtgctattttaaggcaa
actcaggcaatgggtgtcatgaagcaagagcagcctgaaagatatttgcgacttgagcat
ctcctagttagaacttactttgatgcgaatgaggcttaccaagattcaacaaaagaaaaa
cggcgtgcacaaattgctcaagctcttgctgctgaagttactgtggtcccaccttcacga
ttaatggttctaattggccaggctctgaagtggcagcagaaccaaggattacttcctcca
ggaacacagttcgacttatttcgaggaactgctgctatgaaacaagatgtggatgacatg
tatccaactactcttgcacacacaatgaagtttgggacaaaaaattacccagaatctgct
caattctcaccagatggacagtttcttgtctcttgctctgttgatggctttgttgaggtc
tgggattacatcagtgggaagctcaagaaggatcttcagtaccaggctgatgaaaggttc
atgatgcatgaggatccagtgttttgtgctgattttagcagagattctgagatgcttgca
actgggtcaaaagaaggaaagataaaagtttggcgtataagaactggccaatgcttgcgt
cgtcttgaacatgcacattctggatgtgtcacaagtattgtcttctctcgggatggaagc
cagttactaagtacatcttttgacaacactgcaagaatccatggcttgaaatctgggaag
atgttgaaagaattccgtggccattcatcttgcgtcaatgatgctatttttacaactgat
ggaaatcgtgttatcactgcatctagtgattgcacagtaaaggtctgggatatgaagact
acggactgtctgcaaacatttaagccaccgcctcccttacggggaggtgatgcttctgtg
aattctgttcatcttttccccaaaaacactgatcacattattgtatgtaatgagacatcg
tctatatatattatgacacttcaagggcaggttgtaaagagcttctcatctggtaaaaga
gaaggtggagactttgttgcgtcctgtgtgtcaccaaaaggggactggatttactgtgtt
ggtgaagacaggaatatgtactgtttcagctatcaatctggtaaattggaccatctgatg
aaggtccatgaaaagggtgtaacttgcgtcactcatcatccacacaggaatcttgttgct
acatgcagtcaagactgcactatgaaattgtggaagccgtga

DBGET integrated database retrieval system