Quercus lobata (valley oak): 115960744
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Entry
115960744 CDS
T07350
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115960744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115960744
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
115960744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
115960744
NCBI-ProteinID:
XP_030935586
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All DBs
Position
9:6295956..6304701
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AA seq
357 aa
AA seq
DB search
MKNRKKTADGYERWMMKAANNGAAAFGEVERFDDKESGVAGGRGRKKTTGDEEEGNVSDK
GEEDEEEEAARKNRLGLNKREGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAV
GNDPEEREELAPEVPAPPEIKQDEEDEDEDNEEEGGLSKSGKELKKLLGRTGGLNDSDAE
DDDDDEDIDDDIGLSPVLAPKQKDAPKEEPAENSPLKTAPSGPAKGTPSSSKSSKSKRKL
NGDDAKATNGAPPKKELKSSVKEENVPTSKSTVPSKGTPSSSSKSASTSSAGPVTEDEIR
AVLMQKTPVTTQDLVANFKARLRSPEDKNAFAAILRKISKIQKSNGSKSNYVVLREK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataggaaaaagactgctgatggatatgaacgatggatgatgaaagctgcaaat
aatggagctgctgcatttggtgaagtggagaggtttgatgacaaggagagtggtgtggct
ggtgggaggggacgtaaaaaaacaactggtgatgaagaagaaggtaatgtttcagataaa
ggggaggaggatgaagaagaagaggcagcaaggaagaatcgattgggactcaacaaaaga
gaaggtgacgatgatgaggaaggtccaaggggtggtgatcttgatttggatgatgatgat
attgaaaagggtgatgattgggagcatgaagaaattttcactgatgatgatgaagcagtt
ggtaatgatcctgaggaaagagaagaattggcccctgaagttcctgctcctccagaaatt
aagcaggatgaagaggacgaggatgaagataatgaagaagagggtggactgagtaaatct
ggaaaagagttgaagaagctacttgggcgaactggtgggctgaatgattcagatgctgag
gatgatgatgatgatgaggatatcgatgatgatattggcctttcccctgtgctggctcca
aagcagaaggatgcacctaaagaggaacctgctgaaaacagtcctttaaaaacggcgcct
tctggacctgctaagggaaccccatctagctccaagtcttcgaagtctaagagaaaattg
aatggggatgatgcaaaagcaacaaatggtgcacctccaaagaaggaactaaaatcttct
gtaaaagaagaaaatgttcctacttctaaaagtactgtgccttcaaaaggaacaccatca
tcatcatcaaaatctgcttcaacatcatctgctgggcctgtcactgaagacgaaatcagg
gctgttttaatgcaaaagacaccagtgacaactcaggatcttgttgctaattttaaggca
agattaagatcaccagaggacaagaacgcatttgctgccatcctgaggaaaatttctaag
atacagaagtcaaatggatccaagtctaactatgttgttttgagagagaaatga
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