Quercus lobata (valley oak): 115960821
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Entry
115960821 CDS
T07350
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115960821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115960821
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
115960821
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
115960821
NCBI-ProteinID:
XP_030935674
UniProt:
A0A7N2RAI5
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Position
9:complement(13279832..13283513)
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AA seq
314 aa
AA seq
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MGFPRGRSGGFRGGRGDGGGRGGRGGRGGGGGRFGDRGSAMKVRGGGRGGRGFGGGGGGR
GRGGGRGGGMKGGNKVVVEPHRHGGVFIAKGKEDAIVTKNLVPGEAVYNEKRISIQNEDG
TKVEYRVWNPFRSKLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYA
VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPSKYRMLVGMVDVIFSDVAQPDQARILALN
ASYFLKAEGHFVISIKANCIDSTQPAEAVFQSEVNKLKQDHFRPSEQVTLEPYERDHACV
VGGYRVAKKSKSAS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcctcgtggccgtagcggtggattcaggggtggcagaggtgatggaggaggt
cgaggaggcagaggaggtagaggaggtggaggtggaagattcggtgacagaggaagtgcc
atgaaagttcgcggtggcggacgtggtggccgaggttttggtggtggtggtggtggaaga
ggccgaggtggtggtagaggcggtggaatgaaaggtggaaacaaggtggtggttgagcct
catagacatggaggcgtgttcattgctaagggtaaagaagatgctattgttactaagaat
ttggtccctggtgaagctgtctacaatgagaaaaggatctccatccagaatgaagatgga
acaaaagttgaatacagggtttggaatccgtttcgttcaaagttggctgctgccattctt
ggtggggttgatgaaatatggattaaacctggtgcacgggtgctttaccttggggctgct
tctggaaccacagtctctcatgtgtctgacattgttggtcctactggagtggtttatgca
gtggaattttctcatagaagtggtagagacttggttaacatggcaaagaagcgtactaat
gttattccaatcattgaagatgctagacatccttccaagtatcgaatgctggttggcatg
gtggatgtgatattttctgatgttgctcaaccggatcaggcaaggattctagctttgaac
gcatcatattttctgaaagctgaaggtcattttgtaatttcaatcaaggccaactgcata
gattccacacagcctgctgaggccgtatttcagagtgaagtgaataagctaaagcaggat
catttcaggccatctgaacaagttacccttgaaccttatgagcgtgatcatgcttgtgtg
gttggtggctaccgtgttgccaaaaaatcaaaatcagcatcctag
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