Quercus lobata (valley oak): 115960880
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Entry
115960880 CDS
T07350
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115960880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115960880
03036 Chromosome and associated proteins [BR:
qlo03036
]
115960880
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
115960880
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
115960880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
eIF2A
Ge1_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
RMC1_N
Beta-prop_VPS8
DPPIV_N
PD40
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
115960880
NCBI-ProteinID:
XP_030935740
UniProt:
A0A7N2MJD6
LinkDB
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Position
9:25840073..25843504
Genome browser
AA seq
457 aa
AA seq
DB search
MDAGSLNSSSSSSYLNAQSRWPLRDQFHQKKSSKENLDRFIPNRSAMDFDYAHYMLMEGR
KGKENPPASSPSREAYRKHLAETFNMNRTRILAFKNKPPAPVELFPPHFFSSQQQDKPTK
PKRSIPQTSERTLDAPDLVDDYYLNLLDWGSCNVLAIALGNTVYLWDASNGSTSELVTVD
DENGPITSVSWAPDGQHIAIGLNNSEVQLWDSTSNKQLRTLKGGHRLRVGSLAWNNHILT
TGGMDSLIINNDVRVRSHIVETYRGHEQEVCGLKWSPSGLQLASGGNDNLLFIWDRSTAS
SNSPTQWAHRLEDHTSAVKALAWCPFQSNLLASGGGGGDRCIKFWNTHTGACLNSVDTGS
QVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCTVAS
AAADETLKFWNVFGAPQAAKPAPKANPEPFSHVNRIR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcattgaattcttcttcatcaagttcatacttgaacgcacagtctcga
tggcctcttcgtgaccaatttcaccagaaaaagagttccaaagaaaacttggatagattt
attccaaaccgatcagcaatggattttgattacgcgcactatatgctgatggaagggagg
aaaggcaaagagaacccacctgcaagctcaccctccagagaggcctacaggaagcatctg
gcagagaccttcaacatgaaccggactcgaattctcgctttcaagaacaagccccctgct
ccggtcgagttgttcccacctcatttcttctcttctcagcagcaggataagcccaccaag
cccaagcgaagcattcctcagacttctgagaggacattagatgcccctgaccttgtggac
gattactacttaaatttactggattggggaagctgcaatgttcttgcaattgctcttgga
aatacagtttatctttgggatgcttctaatggttctacttcagaacttgttactgttgat
gatgaaaatggccctattacaagtgttagctgggctcctgatggccagcacattgccatt
ggcttgaacaactctgaagtacaattgtgggattcaacatctaacaaacagctaagaact
ttgaaaggaggccacagattgagagttggatcactggcatggaacaatcacatccttacc
actggaggaatggacagtctgatcattaacaatgatgtaagagtcagatcacatattgtc
gaaacctacagaggtcatgagcaagaggtttgcgggctgaaatggtcaccctcaggcctg
caattggcaagtggaggaaatgataatctactattcatatgggacagatcaacggcatct
tcaaattcaccaacgcaatgggctcacaggctcgaagatcacacatctgcagtgaaagct
cttgcttggtgtcctttccagagcaatttgctagcctctggtggaggtggaggtgatagg
tgcataaagttttggaatactcatactggtgcatgcttgaattctgtggacactggctct
caggtttgttcattattgtggaacaagaatgagagagagctgctcagctctcatggtttt
actcagaaccagcttactctctggaaatatccatcaatggtgaagatggccgagctcact
ggtcatacttccagagttctgtttatggctcagagcccagatggttgcacagtggcatca
gcagcagcagatgaaacactcaaattctggaatgtctttggagccccccaagcagcaaaa
cctgctccaaaagcaaaccccgagcccttttcccatgtaaatcgtatccgatag
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