Quercus lobata (valley oak): 115960904
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Entry
115960904 CDS
T07350
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00450
Selenocompound metabolism
qlo00970
Aminoacyl-tRNA biosynthesis
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
115960904
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115960904
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
qlo01007
]
115960904
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115960904
Enzymes [BR:
qlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
115960904
Amino acid related enzymes [BR:
qlo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115960904
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115960904
Prokaryotic type
Other AARSs
115960904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Zn_dep_PLPC
Motif
Other DBs
NCBI-GeneID:
115960904
NCBI-ProteinID:
XP_030935767
UniProt:
A0A7N2RBD8
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Position
9:52102315..52109431
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AA seq
616 aa
AA seq
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MGDEKKDKKVETGKKVPIAGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRG
YNVIYICGTDEYGTTTETKALEENCTPKQICDKYYAIHKEVYNWFNISFDEFGRTSTPQQ
TDICQSIFKKLMENNWLSENMIQQLYCDTCDRFLADRFVEGTCPFPTCNYDSARGDQCEK
CGELLNTTELKDPRCKVCRKTPQIRDTNHLFLELPLLKDKLEVYINDMSVAGSWSQNAIQ
ATHGWLKGGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYVSITACYTPDWEKWW
KNPENVELYQFMGKDNVPFHTVMFPSALLGTGENWTLMKSISVTEYLNYEAGKFSKSKGI
GVFGNDVKDTNIPSEVWRYYLLTNRPEVSDTLFTWADLQAKLNTELLNNLGNFINRVLSF
IAKPPGLGYGSVIPDAAGVESNLLTKTLSEKIGNYVEQYVEAMEKVKLKQALKIAMSISS
EGNAYLQESQFWKLYKQDQASCSLVVRTSVGLVYLLSCLLEPFMPSFSIKVLKQLNLPPE
KISLCDETGDLERAKKPWESLPAGHKIGTPEPLFKELKDEDVEFFREKFAGSQADRNVKD
RSRKEITEQLGKTKLT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaaaagaaggacaaaaaagttgaaaccgggaagaaggtaccgatagcagga
aagaggaacatactcattacaagcgccttgccttacgttaacaacgttcctcatctcgga
aacatcattggcagtgttttaagtgctgatgtttttgctagatattgtcgtcttcgtggc
tataatgtgatttacatatgtggaactgatgaatatggaacaacaacagagacaaaagct
ttggaggagaattgtaccccaaagcagatttgtgacaaatattacgcaattcataaggaa
gtttacaattggtttaacataagttttgatgaattcgggcgcacatcaactcctcaacaa
actgatatctgccaatcaatattcaagaaactgatggagaacaattggctttctgaaaac
atgatacaacagctttattgtgacacatgcgatcgtttcttggctgatcgatttgtggaa
ggcacctgtccatttccaacttgtaattatgattctgcacgtggggaccaatgtgaaaag
tgtggtgagcttctaaatacaactgaacttaaagatccaagatgtaaggtatgtcggaaa
actccccaaattcgtgatacgaaccatttatttctagagctcccactgctgaaggataaa
ttggaggtatatatcaatgacatgtcagttgcaggatcttggagccagaatgctattcaa
gctactcatggatggcttaaaggaggattaaaaccccgctgtattactagggatcttaag
tggggggttcctgttccacatgaaaaatttaaggataaggttttctacgtatggtttgat
gcacctattggttatgtctcaatcactgcatgctacacacctgattgggagaagtggtgg
aagaaccctgaaaatgtagagctgtatcagttcatgggcaaggacaatgtgccattccat
actgtgatgtttccatctgcactccttggaactggagaaaactggacattgatgaagagc
attagtgttacagagtatttaaactatgaagcaggaaagttctccaaaagcaagggtata
ggagtttttggcaatgatgtcaaagatactaacattccctcagaagtgtggcgatactac
ttgctgactaacaggccagaggtctcagacacattgtttacatgggcagacttgcaagca
aaactaaatactgagttactgaataatttgggcaatttcattaaccgagtattgagtttc
attgccaaacctccaggactaggatatggatctgtcattcctgatgctgcaggggtggaa
tcaaatctcttgacgaaaacattgtcagaaaaaattggtaattatgtggagcaatatgta
gaagcaatggaaaaggttaaactaaagcaggcattaaaaattgcaatgagcatctctagt
gaggggaatgcatatctgcaagagagccaattctggaaactttacaagcaagaccaagct
tcctgctctcttgttgtgagaacttcagtggggctggtttatcttctctcgtgtttgtta
gaacctttcatgccatcattttctatcaaggtactaaagcagcttaatttgcctcctgaa
aaaatttcactttgtgatgagactggagatcttgaaagggcaaaaaaaccttgggaaagt
ctacctgctggtcataaaattgggacaccagaacctttgtttaaggagttgaaagatgag
gatgtggaatttttccgggagaagtttgctggaagtcaagctgataggaacgtaaaagac
agaagtcgaaaagaaatcacagagcaactagggaaaacaaaacttacttaa
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