Quercus lobata (valley oak): 115961298
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Entry
115961298 CDS
T07350
Name
(RefSeq) putative two-component response regulator ARR21
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115961298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115961298
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
115961298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
115961298
NCBI-ProteinID:
XP_030936159
LinkDB
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Position
9:complement(16029354..16037747)
Genome browser
AA seq
739 aa
AA seq
DB search
MAMASERVRVDQSFKNKTSIVDIHILVVDDDTTSLAIVSAMLRTWKYDVVAVRNPLDALA
TLRMQKFDLVITDLHMPVMNGLELQKQVEKEFKLPVIMMSADDEENAMLKSLEGGAAFYM
VKPVSPEDLKNLWQYAVAAKKGKSVVIEEVKNTPAKSSVVSCEKNQSAESSVNQEKHDKK
DSKRKGAPKKGKEDGNQKTRGARKRPKVIWTTSLHNRFLEAIKHIGLDKAVPKRILEIMN
VRGLTRENVASHLQKYRLFLKRVAERGLYTSKGLSMRSSFASGLPPSLLFKNFQQNYPQF
PEQQQRRTSMFQPGFGGNFMTLNGSVLGGIPSNRASSSGAQFGYVDSFNALNIGPAHFPV
KHNSSSSNFVPQLGQEQWCSSNNLQQPLFGNINSPPLYQANRPVFANNVGLNFPSLGDMT
CGPKNNATNGLVNTSNCNDTYPQQAQPIRSHLRNDSMLNYNFYTPGILNPSYIPETANNT
GSLNSSNAAPNFGNNNGVNARIQITNGRELIGTNEKSFIDNGTPNGPYSGYGMLNGHNDN
ISLATMRNGTFGKNMEQGESSSAGFENANQLQPWFNSVNQQENGLPIFQTQSQQQPHLVN
GGENDYSYDDLLHAISLMPNLGEDDLNELFLEETYNQPPSQQQGEEEETFEENPLVNELQ
ILELSVSSSLEENPPLSEPAFSQNQGGEQLVDLDFDVDMFISAESPDQDLNQQQLASSND
LYGMSQVENNVNTPLESQA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctagtgagagagttagagtagatcaatctttcaaaaacaaaacctccatt
gtagatatccatattttggttgtagatgatgatactacatctcttgccattgtttctgcg
atgcttagaacatggaaatatgatgttgtggctgttagaaacccactggatgctttggct
actctccggatgcaaaaattcgaccttgttattacagatctgcatatgcctgtaatgaat
gggcttgaattgcaaaagcaagtcgaaaaagaattcaagctgcctgtgattatgatgtcc
gctgatgatgaagagaatgccatgttgaagagtttagagggtggagctgctttctatatg
gtaaaaccagtaagcccagaagacctcaaaaatttatggcagtatgctgttgcagctaaa
aaaggcaaatctgttgttatcgaagaagtcaaaaacacaccagctaaatcatcggttgtt
tcttgcgagaaaaaccaatctgcagaatcatctgtgaatcaagaaaaacatgataaaaag
gattccaagagaaagggtgccccaaaaaagggaaaggaagatgggaatcaaaagactcgt
ggagcccgtaaaaggccaaaggtgatttggacaacttcacttcacaaccgattcttggaa
gccataaagcatataggcttggacaaggctgtgcctaagaggattctcgagatcatgaat
gtgcggggcttaactagagaaaatgtcgccagtcatttacagaagtatcgtttattccta
aagagagtcgcggaaagaggtctttacacctcaaagggcttgtctatgagatcaagcttt
gcctctggtcttcctccatcactcttattcaaaaatttccaacaaaactatccccaattc
ccagaacagcaacaaaggagaacatctatgttccaaccaggatttggaggtaattttatg
acacttaatggttctgtccttggtggtatcccttctaatagggcatcttcaagtggagct
cagtttggatatgtggattcctttaatgctcttaacataggccctgcccattttcccgtt
aagcataattcttcaagttcaaactttgtgcctcaactaggacaagagcaatggtgctca
tcaaacaatcttcagcagccattgtttggaaacataaatagtcctcctctttatcaggca
aatcgtccagtttttgctaacaatgttggattgaattttccatcgctgggagatatgaca
tgtggccctaagaacaatgctaccaatggtctagtgaatacttcaaattgtaatgacaca
tacccacaacaagctcaaccaattaggtctcatcttcgaaatgattccatgttgaactac
aacttttacacacccggaattctcaaccctagttatattccagaaactgcgaacaatacg
gggtctctcaacagttccaatgcagctccaaattttggcaataacaacggtgttaatgct
agaatccaaataactaatgggagagagctaattggaacaaatgaaaagagtttcattgac
aatgggacaccaaatggtccttacagtggctatggaatgttgaatgggcacaatgacaac
atcagtcttgcaacaatgaggaatggaacttttggtaaaaacatggaacaaggagagtct
tcttctgctgggtttgagaatgcaaaccaattgcaaccatggtttaacagtgtcaatcaa
caagaaaatggtttgccaatatttcaaacacagtcacagcaacaaccccatcttgtgaat
ggaggagaaaatgactattcctatgatgatctgctgcatgccatttctctcatgccaaac
ttaggggaggatgatctcaatgagcttttcttggaggaaacctacaaccagcctccttct
cagcaacaaggtgaggaagaagaaacttttgaagagaatcctcttgtgaatgaactccaa
attcttgaactttctgtttcatccagtcttgaagagaatccacctttaagtgaaccagcg
tttagccagaatcaaggcggtgaacaactagtggacttggactttgatgtcgacatgttt
atttcggcggaaagccctgatcaagacctcaaccagcaacaactcgcgagctcaaatgat
ctctatggcatgtctcaggtggagaataatgttaataccccattggaaagccaggcatga
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