Quercus lobata (valley oak): 115961467
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Entry
115961467 CDS
T07350
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115961467
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115961467
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115961467
NCBI-ProteinID:
XP_030936307
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Position
9:complement(25851609..25854962)
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AA seq
396 aa
AA seq
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MKAAILTLFLIFMMIASPCLCNDLGKVFNVISYGAVGNGKTDDTRAFAKAWEAVCNANGI
TSLIIPKGKIFLLNPVQFKGPCRATKVLVQVGGTIAASANLKTWTDNEKWIHFETVDGLA
INGGGQIDGQGSVWWNACSDKHCDDRPTALHFHNCSGLQLSNLRHLNSQKNHISISGCKG
VKINNLRISAPEDSPNTDAIDISTSSNIEVLNTVMETGDDCIAINGGSSNITISGVACGP
GHGISIGSLGKNEAFDTVEEVHVRNCTFKGTQNAARIKTWQGGKGYARKISYENIQIINS
QNPIIIDQNYNPNSLNANAQSAVEISNVTFRNVYGTSVDEIAVDLVCSDHIGCTNIVLNN
IDIKSAIPGKQTISRCNNVHGSTLSPCNPIVPCLSH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgcaatcctcactttgtttcttatcttcatgatgattgcttcaccatgctta
tgtaatgatcttggcaaagtttttaacgttatttcttatggtgctgttggaaatggcaaa
actgatgatacgcgagcttttgcaaaagcttgggaggctgtgtgtaacgcaaatggcatc
acaagcctcattataccaaaaggaaagatattcctgctgaatcccgtccagttcaaaggt
ccttgcagggccaccaaagttcttgtgcaggttggtgggactattgcagcatcagcaaac
ctaaaaacatggactgacaatgagaagtggattcattttgaaactgtagatggtcttgct
ataaacgggggtggacaaattgatggacaaggaagtgtttggtggaatgcttgcagtgac
aagcattgtgatgatcgacccactgctcttcactttcacaactgcagtggccttcagcta
agcaatttgaggcatcttaatagtcaaaaaaatcacataagcataagtggctgcaaggga
gttaaaatcaataatcttcgtatttctgcacctgaagatagcccaaacaccgatgctatt
gacatttctacctcaagcaatatcgaagtcctaaacactgtgatggaaactggtgatgat
tgtattgctatcaacggtgggtcatcaaatattaccatctctggtgttgcatgtggacca
ggccatggtattagcattggcagccttggaaaaaatgaagcttttgacactgtagaagaa
gtacatgtgaggaattgcacttttaaaggaacccaaaatgcagcaagaatcaagacatgg
cagggtggaaaagggtatgctaggaagatctcttatgagaatatccaaattataaattct
caaaaccctatcattattgaccaaaactacaaccctaattctctgaatgccaatgcacag
tcagcagtggagattagcaacgtgacattcagaaatgtgtacggaacttcggttgatgag
atagccgttgatctagtttgcagtgatcacatcggttgcaccaacattgtgttgaataat
attgatataaaatcggctattccagggaagcagactatttctcgctgcaacaatgttcat
ggatcaaccttgtcaccctgcaatcctattgttccatgcctatctcactga
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