Quercus lobata (valley oak): 115962186
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Entry
115962186 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
qlo
Quercus lobata (valley oak)
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
115962186
NCBI-ProteinID:
XP_030936937
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All DBs
Position
9:complement(27394348..27421725)
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AA seq
1143 aa
AA seq
DB search
MSKENADPIPNVPKITVTEEERARISRNFRAAKALLARKRPRLHHHASPSFPHKVGDTNG
IQTSIKRVPLAELQPNTPSPSFVKSKVCENISSSCSVGLTLDRKELVDHSPLENDCVLDS
YTTPMKQQECFDLIDSVSMTSSTLDDDFDESILEEIDALCEQKSAAKAERQVLSCDIDPG
SDHDGNSNGDLSASSESVTGYESVKMEGALDSGSDLDPTTKGSDTSQTIETGNMPEEYSK
YLQSLNDRQREAACNDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGISPSNILAMTFTTA
AASEMRDRIGAVAGKATAKELTISTFHSFSLQLCRLHAEKLGRTSEFLIYGHGQQRRAII
EAVRLLENEKSIQNHNACILGEDSNGITSLQLFKDKSKKWLKFVAQAKASGKTPEECCKM
GDEIGGAILGNYNDILKSCNALDYHDLISCSVKLLTDFPEVFKESQDSWKAIVIDEFQDT
SSMQYDFLRILASHNRITIVGDDDQSIFSFNGADISGFDSFRKDFPNYKEIRLNKNYRST
RCIVEAASSLIQNNKKRCQLKDVLTDNSSGSKIIIKECHNESAQCAFVVDKILETASNGS
AANCSYGNIAILYRRQVSGKVFQMAFRERKIPFNVHGVAFYRKKVVKAIIAMLQTTLPAC
DDGPYHRVFKALLPFEKEEKKRVIDYIDKISTIRKCSFILAASDIFSAKLSGTFKRSQLT
QGRKVLSTLEMISKLVNREQSISAIITSVANMVPQKYLLEQRAVIDVDGGKLLNEDNDIR
SVLQYLLDDVSEFLSTKFVAVEGDAKVAAEGKGCLNALKAFIEFISERERENFRSRRHDN
EKSITLTTIHQSKGLEWDVVFIVKANESEIPLLHEFNGVAKENGNSIEEERRLLYVAMTR
ARKKLFILYVMMDSNWQMLQPSRFLKEIPDHLREVQAEVSVKDLQTKQQHIPNRTAQFSV
DVPREKELSEVDVANDFLKTCIHEASEDLKDPLEASNGNGFLRRFNVEDRSVVSHIFHQW
AKKKAFQDPKRLLDKVGFVIDERLRAKKNKHKDVLSALKSCLSCDEAFQYAEYVLRWEQI
PADQRAHLMREKQEHFQKLRIENSMGSSAATSKQISYLQSLGCTVTPTSRLQASRLIEQY
KSL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaaaatgctgatccaattccaaatgtccctaaaatcacagttacagaggaa
gaaagagctcgaatttctcgcaacttccgagccgctaaggctcttcttgctcgcaaacgc
cctcgcctccatcaccatgcctcccccagttttcctcacaaagttggggatacaaatgga
attcaaaccagcatcaagagagttcctcttgcggagctacagccaaacacgccatccccg
tcttttgtgaagtcaaaagtttgtgaaaatataagcagttcgtgttccgtgggcttaact
cttgatcggaaagaattagttgatcatagtcctttagagaatgactgcgtgttggattct
tatacaactcctatgaaacaacaagaatgttttgatttaattgattcggtttcgatgact
agcagcactctagatgatgattttgatgagtccattttggaagaaatcgatgctttgtgt
gagcagaaatctgctgcaaaagcagaaaggcaggttctaagttgtgacattgacccgggt
agtgatcatgatggtaatagtaatggtgatcttagtgccagttcggagtctgtcactggg
tatgagagtgtaaaaatggaaggggcattggactctgggagtgatttagaccctacaaca
aaagggtcagatacttctcagactatagagactgggaacatgccggaggagtactcaaaa
tacttgcagtctctgaatgatcggcaacgcgaagcagcttgtaatgatatttcagtccct
ttgatgattgttgctggtccgggaagtggaaagacttctacaatggttgggcgtgtgtta
atgctgcttaatgagggaattagcccgtcaaacatcctggcgatgactttcactacagca
gcagcttctgagatgagagatcgcattggagcagtggctggaaaggcaacagccaaggag
ctcacaatcagcactttccattcattttccttgcaactgtgtcgtttacatgctgagaag
ttagggcgcacatcagaattcttaatatatgggcatgggcagcagagaagagcaatcatt
gaggctgtgcggctgttagaaaatgagaagagtatacaaaatcataatgcctgcatactt
ggtgaagattctaatgggataacgtctctgcaactttttaaggataagtcaaagaaatgg
ctgaagtttgtggctcaggctaaagcttctggaaagactcctgaagaatgctgtaaaatg
ggtgatgaaataggaggtgcaatccttgggaactacaatgacatattaaaatcttgtaat
gctctggattaccatgacttaatcagctgttctgtaaagctgcttactgattttcctgaa
gtcttcaaggagtctcaggattcatggaaagccattgtaatagatgagtttcaagacaca
agttccatgcaatatgattttctgcggattcttgcttctcataaccgcataactattgtt
ggtgatgatgatcagtccatatttagtttcaacggagctgacatttctggatttgattca
tttcgcaaagattttccaaactacaaagagatcagactaaataaaaactatcgatccaca
cgctgtattgttgaggctgcatcttctcttatacaaaataataaaaagcgatgccagtta
aaagatgttcttactgataattcttctggatctaagataatcataaaagaatgtcacaat
gagagtgcgcagtgtgcatttgttgttgacaagatcttggaaactgcttctaatggttct
gctgctaactgctcatatggaaacattgcaattctttacaggaggcaggtatcgggaaaa
gtcttccaaatggccttccgtgaaaggaaaatacctttcaatgtgcacggtgtagcattc
tataggaaaaaggtagtcaaagccattattgccatgcttcaaacaacattgcctgcttgt
gatgatggcccataccatcgggtcttcaaggctttacttccttttgagaaggaggaaaag
aagagggtaatcgactatatcgacaaaatttcaactattagaaaatgcagctttatatta
gctgcctcggacatctttagtgccaagctttctggtaccttcaagaggagtcagcttacc
caaggacgcaaagtattgtcgacactagagatgatatcaaaacttgtaaacagggaacaa
tcaatttcagctatcataacctcagtggcaaacatggtgcctcagaaataccttcttgag
caacgggcagttattgatgttgatggaggaaaattgctgaatgaagacaatgacatcaga
tctgttcttcagtacttactggatgacgtctctgaatttttgtcaactaaatttgttgct
gtagaaggggatgctaaagttgcagcagaagggaaaggttgtcttaatgcgctcaaagct
tttattgaatttatatctgagcgtgagagagaaaattttcgttcccggagacatgataat
gaaaaatccatcaccttgactaccattcatcagtcgaaaggcttagaatgggatgttgtt
ttcatagttaaggcaaatgaatctgaaattcctctgttgcatgaatttaatggtgttgca
aaggaaaacgggaactcaattgaggaggaaaggcgcttgttatatgttgcaatgactcgt
gctcggaagaagcttttcattctatatgtcatgatggactctaattggcagatgcttcaa
ccatcaagatttcttaaagaaattccagatcatcttcgagaggttcaggctgaagttagt
gtaaaagatttgcaaacaaagcagcaacacattccaaatagaactgctcagttttctgtt
gatgtgccaagagaaaaggaactttctgaagtagatgttgcaaatgatttcctaaaaact
tgtattcatgaggcttctgaagatctgaaagacccattggaggctagcaatggaaatggc
tttttaagaagattcaatgtggaggatagatcagttgtttcccacatatttcatcaatgg
gccaagaagaaagcgtttcaagatcccaagaggctgcttgacaaggttggctttgtaatc
gatgaacgccttagagccaagaaaaacaaacacaaggatgttttgagtgcactgaagtct
tgcttgagctgtgatgaagcatttcaatatgcagaatatgttttgagatgggagcaaatt
cctgctgatcaacgagcccatttgatgcgggaaaagcaggagcatttccaaaagttaagg
attgaaaattcaatgggttcatcagcggcaacatctaaacagatctcttatttgcaaagt
ttgggatgcactgtcacccctacatctcgtctccaagcttcccgtttgattgagcagtac
aaatcattgtga
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