KEGG   Quercus lobata (valley oak): 115962302
Entry
115962302         CDS       T07350                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:qlo01009]
    115962302
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115962302
Enzymes [BR:qlo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115962302
Protein phosphatases and associated proteins [BR:qlo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115962302
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115962302
SSDB
Motif
Pfam: JmjC zf-C5HC2 JmjN KDM5_C-hel
Other DBs
NCBI-GeneID: 115962302
NCBI-ProteinID: XP_030937071
LinkDB
Position
9:complement(39371503..39381601)
AA seq 849 aa
MGPEYIRSSLNNEKVEGLSAPPGFVSRTSFVLKRVEKSDETNNTISSLDASKKEPIKTDT
MFDKTDIAELSGTLKRKPWILFDERNYSPKEFESGQRDMNFPLKTCLPKGVSHGCPDCNN
CLKVTARWRPEDARIEVIEEAPVFHPTEEEFEDTVEYIARIRPRVEPYGICRIVPPPSWQ
PPCLIKEKGIWENSTFVSHTQRIDGLQNQSSESQMSRSSENVKGKRRRSLRMGSDYDPGD
EDTSNCDTVGRFNIEVFESESGPEFTLETFNRCADDFKRQYFCSGDKVTGSDKNSTKFQN
QWEPSVENIEGEYRRIVENPTEEIEVLFGENLDTGVFGSGFPRVSNSVETSRYPKYLESG
WNLNNISRLPGSFLSFESWETSGIVVPQLRIGMCFSSLHWKTEEHHLYLLRYMHLGAPRI
SYCIPRSYNVKFKAAVKKYFPDLLVEQHELGNSLVKEVFISRIKSEGIPVYRCIQYPREF
VLILPGAYHSGFDCGFNCVEVVNFAPLDWLPFGQNAVELYREQRRKTSISFDKLLLGAAR
EAVKAQWEFSLRSNNTLHNLRWRDGCGKDGILTKAAKSRIKCESIMRKYLCTSSKLQKMS
KNFDASSKMECAVCFYDLHLSAAGCQCNPNKFSCLSHAKQLCSCPWSDKFFLFRYEMSEL
DLLIEALEGKLVAVYKWAREDIGLSLQSYSPKVISQAEGFISGLASRSEESKQKEHKFQD
VGTPNGMGRNSVSSIKAELKARLLQSKTLNELKAKDSTVGTQDAAVRSGITSTSASSIKA
EMKLRLPQSTTLDKLKEKDKATSTNISVATSNYISFLQREMTSEVSSESWSDSSSSDSDV
EIKSWLLAK
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgggcccagagtacataaggtcttctctcaataacgagaaggttgaaggtctctcggct
cctccaggttttgtctctcgtacatcctttgtacttaagagggttgaaaaaagtgatgaa
accaataatacgatttcctccttggatgcatctaaaaaagagccaatcaagacagacact
atgtttgacaagactgacattgcagagctgtcaggaacactcaaacgcaaaccatggata
ctctttgatgaaagaaattatagcccaaaggaatttgaatctggacagcgtgatatgaat
tttcctttgaaaacttgccttccaaaaggggtttctcatggatgcccagattgtaataac
tgtctgaaggtaacagcaaggtggcgtcctgaagatgcaagaatagaagtcattgaagag
gctcctgttttccacccaacagaagaagaatttgaagacacggttgagtatattgcaaga
atacgtcctagggtggaaccatatggaatttgtcgtattgttcctcctccttcctggcaa
cctccctgcctaataaaggaaaagggcatatgggaaaattccacatttgttagccatact
cagcggatagatgggcttcaaaatcagtcttcagagagtcaaatgtctagatcttctgaa
aatgtgaagggtaagaggagaagaagtttgagaatgggttcagactatgatcctggcgat
gaagatacctcaaactgtgacactgttggacgttttaatattgaagtctttgaatctgaa
tctggtccagagttcactcttgaaacttttaaccgatgtgcagatgatttcaagcgccaa
tatttttgcagtggggataaggttacaggttcagataaaaattcaaccaaatttcaaaat
cagtgggaaccatcagtggaaaatattgaaggtgaatatagacgtatcgttgagaatcca
actgaagaaattgaggtgctttttggtgaaaacctggacactggggtttttggcagtgga
tttccaagagtttccaattctgtagagacatctcgttatcctaagtatttggaatcaggc
tggaacttaaacaatatatctagactgcctggttctttcctttctttcgaaagctgggag
acttctggtatcgtagtgcctcagcttcgcataggaatgtgcttttcctcacttcattgg
aaaactgaagagcaccacctatatttattgcgttacatgcatttgggtgctcctagaata
tcctattgcattccaaggagctataatgttaaatttaaggcagctgtgaagaagtacttt
ccagatttgttggttgagcaacatgagttaggcaatagtctggttaaagaggtatttatc
tccaggataaagtcggagggtatacctgtctatcgctgcattcagtatcccagggagttt
gttctcatccttccaggagcatatcattcgggatttgattgcggctttaattgtgttgag
gtggtgaattttgctccccttgactggttgccctttgggcagaatgctgtggaactctat
cgtgagcagcggagaaagacatcaatatcctttgataagctgttacttggagcagctagg
gaagctgtgaaggcacaatgggagttttcactgcgaagcaataatacattacataatttg
agatggagggacgggtgtggaaaggacgggatcttaacaaaagcagccaagtcacgtatt
aaatgtgaatctattatgaggaagtatctttgcacctcttcaaagttgcagaagatgagc
aaaaattttgatgctagcagcaagatggaatgcgcagtgtgtttctatgatttacacctc
tctgcagcaggttgtcaatgtaatcctaacaaattttcatgtctgagtcatgccaagcag
ctctgttcttgcccttggagtgacaaatttttcctcttccgatatgaaatgagtgagtta
gatcttcttattgaagctttagaaggaaaactagttgcagtctacaaatgggctagagag
gatattggattgtctctgcagtcctattcccccaaagtcatttcccaggcagaaggcttt
ataagtggtctagcctctcgttcagaagaatcaaaacaaaaggagcataaattccaagat
gttggaacacccaacggcatgggtagaaattctgtttctagcattaaggctgaattgaag
gcacgtctgctccagtctaaaaccttaaatgaattgaaagcaaaagacagcactgttgga
acccaagatgcagcagtacgcagtggcatcactagtacttctgcttctagcatcaaggca
gaaatgaagttgcgtttgccccaatcaacaacgttggacaaactgaaagagaaagataaa
gcaacatctacaaatatttcagttgcaacctcaaattatatttcatttttgcaaagagag
atgacatctgaagtttcttctgaaagctggagcgactcaagttcctcagactctgatgtt
gagatcaaatcttggcttttagctaagtga

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