Quercus lobata (valley oak): 115962452
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Entry
115962452 CDS
T07350
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115962452
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
115962452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
AAA_14
AAA_2
nSTAND3
Viral_helicase1
AAA_24
Cytidylate_kin
ATPase_2
NPHP3_N
AAA_28
NACHT
ABC_tran
RNA_helicase
KAP_NTPase
AAA_5
AAA_30
TIP49
AAA_33
AAA_11
SLFN-g3_helicase
RuvB_N
TsaE
DUF815
AAA_7
AAA_17
Rad17
PduV-EutP
bpMoxR
ResIII
nSTAND1
IstB_IS21
AAA_3
Mg_chelatase
AAA_19
SPC25
SRPRB
Cytidylate_kin2
KTI12
DnaB_C
NTPase_1
Sigma54_activat
NB-ARC
CPT
Motif
Other DBs
NCBI-GeneID:
115962452
NCBI-ProteinID:
XP_030937149
UniProt:
A0A7N2MLS7
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Position
10:complement(6865200..6871578)
Genome browser
AA seq
466 aa
AA seq
DB search
MSTPMEITLQNPPDPDISDQNAVASASASAPSPPPPPPPLPPVLADDRVSVSVEACLKPS
STARIDDVRSAIERMLEKRSLSYIDGPIPVPLDDPFLTENVERIRICDTDEWVQNHEILL
FWQVKPVVHVFQLSEEGPCEDLSGDGQLPSFNEWMLPAKEFDGMWESLIYESGLKQRLLR
YAASALLFTEKGIDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYTQSQLVE
VNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPS
DSIRVVNALLTQMDKLKSSPNVIILTTSNITTAIDIAFVDRADIKAYVGPPTLQARYEIL
RSCLQELVKKGILSNFQDCDHLVIPNFASMKEKLSMPEMQEAQTKFHLCKQLLEAAEACE
GMSGRSLRKLPFLTHAALSNPYNCDPSKFLCKMVDTARGELSELPD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagtactccaatggagataacacttcaaaaccctccagatcccgatatctccgaccaa
aacgccgtcgcatcagcctcagcctcagctccctctcctcctcctccgcctccgcctctt
cctcctgtactcgccgatgacagagtctccgtttcagttgaagcttgcttaaagccctcc
agcacagctcggatcgacgatgtccgctcagccatcgagagaatgcttgaaaagaggagt
ttaagctatattgacggccccattccagtgcctcttgatgatccgtttctcacagaaaat
gtggaaagaatccgtatttgcgacacggatgagtgggtgcagaaccatgaaattcttttg
ttctggcaagtcaagcctgttgtgcatgtctttcagcttagtgaggaaggaccatgtgag
gacttaagtggagatggccaacttcctagctttaatgaatggatgcttcctgcaaaggaa
tttgatggcatgtgggaaagtttaatttatgaatctggtctcaagcaaaggctgttgcgg
tacgcagcaagtgcattactctttactgaaaagggtattgatcctttccttgtgtcatgg
aaccgcattattcttttgcatggacctccaggaacagggaagacatctttgtgtaaagca
ttagcccagaagttatccatccgattcaactccagatacacacaaagccaattggttgag
gttaatgcacattctttgtttagtaaatggttctccgaaagcggcaagttggttgcaaag
cttttccaaaaaattcaagagatggtggaggaagaaaacaatctggtatttgttttaatt
gatgaagttgaaagtcttgctgctgctagaaaagctgctttgtccggttctgaaccttca
gactctattagggtcgtgaatgcgctactaactcagatggataaattgaaatcatcacca
aatgtgataattctcacaacctccaatattaccactgctattgatattgcatttgttgat
cgagctgatatcaaagcatatgttggtcctccaacactccaagctcgttatgaaatttta
agatcctgtctgcaggaacttgtgaaaaagggaatcttatcaaattttcaggattgtgat
caccttgtaattccaaattttgccagtatgaaagaaaagttgagtatgcctgagatgcag
gaggctcagacaaaatttcacctgtgtaaacaattgcttgaagctgcagaagcatgtgag
ggaatgagtggacgatctttaagaaagcttccatttttgacgcatgcagctctctccaat
ccttacaattgtgaccctagcaagttcttgtgtaaaatggtagatacggcaaggggcgag
ctttctgagctgcctgactga
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