Quercus lobata (valley oak): 115962629
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Entry
115962629 CDS
T07350
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115962629
04121 Ubiquitin system [BR:
qlo04121
]
115962629
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115962629
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
115962629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
115962629
NCBI-ProteinID:
XP_030937373
LinkDB
All DBs
Position
10:31428960..31433300
Genome browser
AA seq
1128 aa
AA seq
DB search
MLFNLEFVDTSFVCLESQNMSSQAPNDRRDHRTRFPAQSARHQWIPRGSTATTVVNQNPN
PNPSLIPIPNPNPPLRFSSNYRSGGDSNSSSAPPESRAGGNNFPRGRGYVGYRPLNQRKD
RESQVGKGLKDLNLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLVCI
KKWARAPTSIDLSAEKSQGFNWRCPGCQSVQLTSLKEIRYICFCGKRPDPPSDLYLTPHS
CGEPCGKPLERELGAGESEDICQHNCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSD
RKSVLTCGQRCDKLLKCERHRCERTCHVGSCDPCKVSVDASCFCKKKMEVVLCGDMSVKG
EVKTEEGLFSCNSTCGNKLTCGNHACCEVCHPGSCGECELMPSRVNTCYCGKTSLQEERQ
SCLDPIPTCSKTCDKLLPCGMHKCTESCHAGDCPPCLVRVSQKCRCGSTSQIVECYKTVM
EEKFTCDKPCGRKKNCGRHRCSERCCPLSNSNNFLPGDWDPHTCSIPCGKKLRCGLHSCK
SLCHSGHCPPCLETIFTDLSCACGRTSIPPPLPCGTPHPSCQLPCSVPQPCGHSSSHSCH
FGDCPPCTVPIAKECIGGHVVLRNIPCGSKDIRCNRLCGKTRQCGLHACGRTCHAPPCDT
SPGPEPGLKTSCGQTCGAPRRDCRHTCKSPCHPSSLCPDERCDFPVTITCSCGRITATVP
CDAGGNIGGFSADTLYEASIIQKLPVPLQPVEASGKKIPLGQRKLMCDDECAKLERKRVL
ADAFDVNSNLDALHFGENSAVSEILTDLYRRDPKWVLSVEERCKFLVLGKSRGTTSSLKV
HVFCPMIKDKRDVVRLIADRWKLAIYSAGWEPKRFIVVHVTPKSKPPPRVIGVKGSTNIN
TPHSPAFDPLVDMDPRLVVSFLDLPRDSDISALVLRFGGECELVWLNDKNALAVFSDPAR
AATAMRRLDHGSVYHGAVVVIPNGGAVVASSATSAWGGASTAKEGGLAAAMKGNPWKKVV
VQEPGWKEDVWGDEEWPGDNADLLASAWKKEAPIAATLNRWSVLDSETSLSSSAAPLRIE
DPGKQAASHSGPMLESDASGSNSAGQHQDNFSGTEMSEVVDDWEKAFE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaatttggagtttgttgatacaagctttgtgtgtttggaatcacagaatatg
agctctcaagctccaaatgatagaagggatcataggactagatttcctgcacagtctgct
cgtcaccagtggatccctagaggatccacggccaccactgttgtgaaccagaacccgaac
ccgaacccaagcctaatcccaatcccgaatccaaacccaccattgcgcttcagttccaac
tacagaagtggtggggactcgaactctagttctgctccacccgagagtcgggctggaggc
aataattttccgaggggaaggggatacgtgggttatcggcctttgaatcagagaaaggat
agggagagtcaggtggggaagggattgaaggacttgaatttacctcagcttgtgcaagaa
attcaggagaagctgacgaagggcaccgttgagtgcatgatttgctatgacatggtgcgg
aggtcagcacccatttggtcttgctcgagctgttactctatttttcatctggtttgtatc
aagaaatgggctcgggcgcctacttctattgacttgtctgcagagaagagtcagggattt
aattggcggtgtcctggatgtcagtcggtgcagcttacatcgctgaaggagattcgatat
atttgcttttgtgggaagaggccagacccaccttctgatttgtatttgacgccacattcg
tgtggagaaccatgtggcaagccacttgagagggaactaggtgctggtgagagtgaggat
atttgccaacataattgtgttttgcaatgccatccaggtccatgccctccttgtaaagct
tttgccccaccccgtttatgtccttgtgggaagaaaacaattacaacacggtgctctgat
cggaagtctgttcttacttgtggtcagcgttgtgacaagcttcttaaatgtgagcgtcat
aggtgtgagcggacctgccatgtgggttcttgtgatccatgtaaggtttcagtcgatgcc
tcttgtttctgcaagaagaagatggaggttgttctttgtggggacatgtctgtgaaggga
gaggtgaaaacagaggagggtcttttttcttgtaattcaacttgcggaaataagcttaca
tgtggtaatcatgcctgctgtgaagtttgccatcctggatcttgtggagagtgtgaattg
atgccgagcagggttaatacatgctattgtgggaaaacaagtttgcaggaggaacgacag
agctgtttggacccaattccaacctgttctaagacatgtgacaagctccttccttgtggg
atgcataaatgtacagagtcatgccatgcaggggattgcccaccatgtttggttagagtt
tctcaaaaatgccgttgtggatcaacttctcaaattgtggaatgctacaaaacagtgatg
gaggagaaatttacttgtgataagccttgtggacggaagaagaattgtggaaggcacagg
tgcagtgagcggtgctgccccctctctaattctaacaattttctccctggggattgggat
ccacacacttgctcaatcccatgtgggaagaagctaaggtgtgggctgcattcttgtaaa
tcactttgtcacagtggccattgccctccttgccttgaaacaattttcactgatttgtca
tgtgcttgtgggagaacttcaatccctcctccattgccttgtggcacacctcatccttca
tgtcaactcccgtgttcagttcctcagccttgtggccattcatcttctcacagctgccac
tttggagactgcccaccttgtacggtgcctatagcaaaggaatgcattggtggacatgtt
gtacttaggaacataccttgtgggtcaaaggatatcagatgtaaccggctctgtgggaag
accaggcagtgtggactgcatgcctgtggaagaacttgtcatgcaccaccttgtgatact
tctcctggacctgaaccaggtttaaaaacttcttgtgggcagacatgtggtgctcctagg
agagattgtaggcatacatgtaaatcaccttgtcacccatcttctctttgtcctgatgaa
agatgtgatttccctgtcacaatcacttgttcttgtggccggataacagcaactgttcct
tgtgatgctggaggcaacattggtggtttcagtgctgatactttatatgaagcttccatt
atccaaaagttgccagtgccacttcagccagtggaagcatctggcaagaaaatcccactt
ggacaaaggaagctcatgtgtgatgatgaatgtgctaagttggaacgtaaacgggttcta
gcagatgcctttgatgttaattcaaacttggatgcccttcattttggagagaactccgct
gtttctgaaattcttacagacctctataggcgtgatccaaagtgggtattatctgtggag
gagagatgtaagttcttggtacttggcaagagcagaggaactacaagtagtcttaaggtt
catgttttttgtccaatgattaaggataagagagatgtggtaaggttaattgccgacagg
tggaaacttgctatttattctgcaggttgggagccaaagcgttttattgtggttcatgtt
acacccaaatcaaaaccccctcctcgtgtgattggggttaagggttccaccaacataaac
acaccccattccccagcttttgatcctttggtagacatggatcccagactcgttgtttct
tttcttgatttgccaagagattcagatataagtgcattggtcctgaggtttggtggggaa
tgtgaactggtttggctgaatgacaagaatgcattggccgtatttagtgatcctgctcga
gctgcaactgccatgagaagattggatcatgggtcagtatatcatggagctgttgtggtt
atcccaaatggtggtgcagtagtggcatcatcagctactagtgcatggggaggagccagt
acggccaaggaagggggattagcggcggctatgaagggtaacccatggaagaaggttgtt
gttcaggagcctggttggaaggaagatgtatggggtgatgaagagtggcctggtgacaat
gcagatttgctggcatctgcatggaagaaagaagctccaattgctgctacgctaaatcgg
tggagtgttctagactctgaaacgtctttgagttcatctgctgcacctctcagaatagag
gatcctggaaaacaggctgcaagtcattcaggtccaatgctggaatctgatgcaagtggt
tcaaattcagccgggcagcatcaagataattttagtggaacagaaatgtctgaggtggta
gatgactgggagaaggcttttgagtga
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