Quercus lobata (valley oak): 115962688
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Entry
115962688 CDS
T07350
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115962688
Enzymes [BR:
qlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
115962688
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115962688
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
115962688
NCBI-ProteinID:
XP_030937433
LinkDB
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Position
10:complement(1830496..1840806)
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AA seq
387 aa
AA seq
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MNKRKREEEAGNNNSMEIVWQTPANPPEPQDYILRNGRRHVRPYYFEFISHVKNRWAGKT
IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEIVPVSYIVKQSQKISHFLHRHEPPVMAYD
VSVLQNELDVLTVCKPASVPVHPCGQYRKNTIVGILQAEYGLAPLFPIHRLDRLVSGLLI
LARNASKADFFRQQIEAGLVQKQYIAKVIGVFPEDEIMVDANIDYNAREGRSTAEVENAN
GAVKGKAASTKFTRISTDGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEHVIG
RSAGGMSADRAAANSGHSPEFIFHDNCPGEENSGDDFSIDPMCTNCPNLAPKGYDGLEEG
LWLHCFRYSGAGWTYECPYPDWAPLPE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaggaagcgggaagaagaggcgggcaataacaatagcatggagatcgtttgg
caaactccagccaatccaccagagccacaagattacatcttacgcaacgggaggcgccac
gtcagaccgtactacttcgagttcatctctcacgttaagaatcgttgggcaggcaaaacc
attgtcgatttgttcgccgaggaattcaaaggccgaccatatgattactatgttagtgct
gttaaatgtggaaggatacaagttgatggagagatagtgcccgtttcgtatatagttaag
cagtcgcaaaagattagccattttttacacaggcatgaaccgccggtgatggcttatgat
gtttctgttcttcagaacgaactggatgtgctgacggtttgcaagccagcgtctgttccg
gtgcacccctgtggtcaatatcgtaaaaacaccattgttggcatccttcaagcagagtat
ggattggcacctctatttccaattcatcggctagatcgtcttgtctcaggactccttatt
ttggccagaaatgcttcaaaggctgacttctttaggcaacagattgaagctgggttggtg
cagaaacaatatattgcaaaggtcatcggggtatttccagaggatgagataatggttgat
gctaacatagattataatgctcgagaaggaaggagcacggcagaggtagaaaatgctaat
ggtgctgtgaaggggaaggctgcttctactaaatttacccggattagtacagatggcact
catagcattgttttgtgtgaaccaatcacgggccgaactcatcaaatccgtgttcatttg
cagtatacaggtcatccaattgccaatgacatgctttacctctcagaacatgtaattggt
cggtctgctggaggaatgagtgctgatagagctgctgctaattcaggccattcaccagag
ttcatttttcatgataattgtcctggtgaagagaactctggagatgattttagcattgat
cctatgtgtacaaattgcccaaatctggccccaaaaggatatgatgggcttgaagagggt
ttgtggctacattgttttaggtactctggagctggatggacctatgaatgtccatatcca
gattgggcaccacttcctgaataa
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