Quercus lobata (valley oak): 115962838
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Entry
115962838 CDS
T07350
Name
(RefSeq) agamous-like MADS-box protein MADS2
KO
K09264
MADS-box transcription factor, plant
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115962838
Transcription factors [BR:
qlo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
115962838
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
ArAE_2_N
Ham1p_like
SabA_adhesion
Rootletin
Motif
Other DBs
NCBI-GeneID:
115962838
NCBI-ProteinID:
XP_030937570
UniProt:
A0A7N2RBZ9
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Position
10:20314081..20327668
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AA seq
244 aa
AA seq
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MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
PSMLKTLEKYQKCSYSALEASRPINETQSSYQEYLRLKAKVEVLQRAQRNLLGEDLGPLN
TKELEQLERQLETSLNQIRSTKTQYMLDQLVDLQNREHMLVEANRSLRQKLDESNNAQVP
LRQAWEAGGQSIQYSQLPPQSEGFFQPLGGNSTLQIGYNPVASEEMNVGAPAQNVHGFIP
GWML
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaagagttgagcttaagaggatagaaaacaaaatcaacaggcaggtgaca
tttgctaagagaagaaatgggctgctcaagaaggcttatgagctctcagttctctgtgat
gctgaggttgctctcatcattttctccaaccgtggcaagctctatgagttctgtagcagt
cctagcatgttgaaaacacttgaaaagtaccaaaagtgcagttatagtgcattggaagcc
agccgaccaatcaatgagactcagagcagctaccaggaatatttgaggctaaaagcaaaa
gttgaggttctacagcgagctcagagaaatctccttggggaagatttgggcccattaaac
acaaaggagctggagcaacttgagcgtcaactggagacatccttgaaccaaattaggtca
actaagactcaatatatgcttgatcagcttgttgatcttcaaaatagggaacacatgctg
gtggaagcaaacagatcacttaggcagaagttggatgaaagcaataatgcacaagttccc
cttcgacaagcatgggaagctggaggccagagcattcaatatagccagcttcctcctcaa
tcagaggggttctttcaacctttgggaggcaattccacactgcaaattggatacaatcca
gtagcttcagaggagatgaatgttggagctccagcacaaaatgtccatgggttcattcct
gggtggatgctttag
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