Quercus lobata (valley oak): 115963065
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Entry
115963065 CDS
T07350
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115963065
03036 Chromosome and associated proteins [BR:
qlo03036
]
115963065
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115963065
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115963065
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115963065
microRNA pathway
RISC loading complex
115963065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
115963065
NCBI-ProteinID:
XP_030937812
LinkDB
All DBs
Position
10:32438654..32446249
Genome browser
AA seq
1068 aa
AA seq
DB search
MVRKRRTELPSGGESSESQQESSGASSGRGSQQRPAERSAPPQQQQQGGGGYQGGRGWGP
QGGRGGYGGGRGGRGMPPQQQYGGPPEYQGRGRGGPPQQGSRGGYGGGGHNGRGIGPSSG
GPSRPQVPELHQATQVPHQPGVIPPQSTLPSEASSSSQLPESSQVVSSLSTLTIEEVSAP
AQPIQPVPPSSKSVRFPLRPGKGSTGTKCMVKANHFFAELPDKDLHQYDVSITPEVTSRG
VNRAVMEQLVKLYKETHLGKRLPAYDGRKSLYTAGPLPFLSKEFKIPLIDEDDGSGGQRR
EREFKVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGRSFYSP
DLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVTS
RPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVE
YFYETYGFSIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQ
RPQERERDIMQTVEHNAYHNDPYAKEFGIKISERLASVEARILPAPWLKYHDTGREKDCL
PQVGQWNMMNKKMVNGGTVNNWICINFSRNVQDSVARGFCYELAQMCYISGMAFNPEPVL
PPLSARPDQVERVLKTRYHDAMTKVQPQGKELDLLIVILPDNNGSLYGDLKRICETDLGL
VSQCCLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVT
HPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGM
IKELLISFRRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFV
VVQKRHHTRLFANNHHDRNAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA
HYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSD
SGSMTSGAAAGRGMGGAGPRSTRPPGANAAVRPLPALKENVKRVMFYC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagagacgaaccgagcttcctagtgggggtgaaagctctgagtctcaacag
gaaagcagtggagctagtagtggtcggggttcccaacaacgcccagctgaaagaagtgct
ccaccccagcaacagcagcagggaggaggaggataccaagggggtagaggttggggccct
caaggaggtcgaggaggttatggtgggggtcgtggtggtcgtggaatgccacctcagcag
cagtatggtgggccccctgaatatcaaggcaggggaaggggagggccaccccagcaaggt
agtcgtggagggtacggtggtggtggccacaatggccgtggcataggaccttcttctggc
ggcccatccagaccacaagttcccgaactgcaccaagcaacccaggttccacatcagcct
ggggtgattccgcctcagtccacgctgccatctgaggctagttcatcttcccaactgcct
gagtcatctcaagtggtctcatctttaagtacactaacaattgaagaagtttctgctcct
gcccagcctattcaacctgtgccaccatctagtaaatcagtgaggttcccccttcggcct
ggcaagggtagcactggaacaaaatgtatggttaaggctaaccacttctttgcagagtta
ccagacaaagatctgcaccagtatgatgtttctatcacaccagaggtgacatcacgagga
gtcaaccgggcggtaatggaacaattggtgaaattatataaggagacacatcttggaaag
aggcttcctgcctatgatgggcgaaagagtctatatactgctgggccactcccttttcta
tcaaaggagtttaaaatcccactcattgatgaagatgatggatcgggcggacagaggaga
gaaagagaatttaaagttgtgataaaactggctgcacgtgcggacctgcaccatttagga
ctctttttgcagggtaggcaagctgatgctccccaggaagcccttcaagttcttgatata
gtcctgcgtgaattgcccactactaggtactgtcctgtgggtcgttcattttattcacct
gatcttggaaggaggcagccattgggtgagggtttggagagttggcgtggtttctatcaa
agtattcgtccaactcaaatgggattgtctctgaatattgatatgtcttctactgctttc
attgagccattgccagtaattgaatttgtgacacagctgctgaatagggatgtcacctcc
cgacctttgtctgatgctgatcgtgtgaagatcaaaaaggctctgcgaggagtcaaagtg
gaggttactcaccgtggaaatatgcgcaggaagtaccgtatatctggtttaacttcacag
gcaacacgagagctgacttttcctgttgatgaaaggggtacgatgaaatctgtagttgag
tacttctacgaaacttatggtttttccattcaacatacgcaatggccttgtctgcaagtg
gggaatcaacagaggccaaattatttgcctatggaggtttgcaagattgttgagggtcag
aggtactccaagagattaaatgagagacagattactgctttgttgaaggtgacatgccag
cgtcctcaagagagagagcgtgatataatgcagactgttgaacacaatgcttaccataat
gacccttatgcaaaggagtttggaatcaaaatcagtgagaggcttgcttcagttgaagct
cgcatccttcctgcaccatggttgaagtaccatgatacaggcagagaaaaggattgcttg
ccccaagttggacaatggaacatgatgaataagaaaatggtcaatggaggaacagttaac
aactggatctgcattaatttttcgaggaatgtgcaagatagtgtagcccgtgggttttgc
tatgaacttgcacaaatgtgttacatttctggcatggcatttaatcctgaacctgtgctt
ccaccattgagtgctcgtcctgatcaagtggagagagtcctgaaaactcgttaccatgat
gccatgactaaagtccagcctcagggaaaggagcttgatctgcttattgttattttgcca
gataacaacggctctctttatggtgatttgaaacggatttgtgagacagatcttggactt
gtttcgcagtgctgcttgacaaagcatgtatttagaatgagtaaacaatatttggcaaat
gtggcacttaagattaatgtcaaggtggggggcaggaatactgtcctcgtcgatgctctg
tcaaggcgtatacctttagtcagtgaccggcctactataatttttggtgctgatgtaacc
catcctcatccgggagaggattcgagcccatcaattgcagctgttgtggcttctcaagat
tggccagaagtcacgaagtatgctggtttggtttgtgcacaagcccatcgacaagagctg
atccaagatctgttcaagacatggcaagatcctgttcgggggacagtttctggtggaatg
attaaggaactactcatatcttttcggagagcaactgggcagaaaccaaagcgaatcata
ttttacagggatggtgtgagtgaaggccagttttatcaagttttgctgtatgagctagat
gctattcgcaaggcatgtgcttctttggagccaaactatcaaccacctgtgacgtttgta
gtggttcaaaaacgccatcacactaggttgtttgcaaacaaccatcatgaccgcaacgca
gttgataagagtggaaacatattgcctggtaccgttgtagactccaagatttgtcaccca
actgaatttgatttctatctttgttctcatgctggaattcagggtacaagtcgtccagct
cattatcatgtgctctgggatgagaacaagtttacagctgatgggctgcagtcccttaca
aataatctttgctacacatatgcaaggtgtacacgttctgtttctattgtgccccctgca
tactatgcccatcttgctgctttccgagctcggttctatatggagccagagacgtcagat
agtggttcaatgacaagtggtgctgctgctggacgtggcatgggcggagcaggtccacga
agcacccgtccaccaggtgctaatgccgctgtgagacccctacctgcacttaaagagaat
gttaagagggttatgttctactgttag
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integrated database retrieval system
