KEGG   Quercus lobata (valley oak): 115963087
Entry
115963087         CDS       T07350                                 
Name
(RefSeq) SKP1-like protein 1A isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03083  Polycomb repressive complex
qlo04120  Ubiquitin mediated proteolysis
qlo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115963087
   04120 Ubiquitin mediated proteolysis
    115963087
  09126 Chromosome
   03083 Polycomb repressive complex
    115963087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115963087
   04121 Ubiquitin system [BR:qlo04121]
    115963087
   03036 Chromosome and associated proteins [BR:qlo03036]
    115963087
Membrane trafficking [BR:qlo04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    115963087
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     115963087
   Cul7 complex
     115963087
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115963087
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     115963087
SSDB
Motif
Pfam: Skp1_POZ DUF5401
Other DBs
NCBI-GeneID: 115963087
NCBI-ProteinID: XP_030937837
LinkDB
Position
10:complement(18783718..18806186)
AA seq 175 aa
MSSSSTSSEKKITLRSSDGEAFEVEEKVATESQTIKHMIEDDYSEIPLPNVTSNILTLVI
EYCKKHVEAADPVPETSNSSLTEKTHDDPLTAAWDAEFVKVDQSTLFDLIVVPLNLLKDC
KVLQNLSLHGNPILMVQFQQMEGFQDFEARRKKFDKQIDSNVMIGSTCLDEGVDL
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtcttcttcttcaacgagttctgagaagaaaataacgctgaggagctcggacggcgag
gcgttcgaggtggaagagaaggtggcgacagagtcacagacgataaagcacatgatcgaa
gacgactacagtgagataccattgccgaacgtgacaagcaacatcctcacgctcgttatc
gagtactgcaagaagcacgtcgaggctgccgaccccgtgcccgagacttctaactcttct
ttgactgagaaaactcatgacgatccgctcactgctgcctgggacgccgagttcgtcaag
gtcgaccagagcaccctcttcgaccttatagtggtacctctgaatctattgaaagactgc
aaagttctgcagaatctctccttgcatggcaatcctattttaatggttcaatttcagcag
atggaaggatttcaagattttgaagcaagaagaaagaagtttgacaagcaaattgattca
aatgtgatgattgggtcaacatgccttgatgagggtgttgatctatga

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