Quercus lobata (valley oak): 115963098
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Entry
115963098 CDS
T07350
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115963098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115963098
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115963098
Prokaryotic type
Archaeal type
TFB
115963098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
115963098
NCBI-ProteinID:
XP_030937850
LinkDB
All DBs
Position
10:complement(14423467..14427857)
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AA seq
312 aa
AA seq
DB search
MADLFCRDCNQLTEVVFDHSAGDTICSECGLVLEAHSIDETSEWRTFANESNDHDPARVG
GPMNPLLSDGGLSTVISKPNGTSSGFLTSSLGKWQTRGSNSDRHLIEAFKAIAIMSDRLG
LVTTIKDRASEIYKKVEDQKPLRGRNQEAIVAACLYIACRQENKPRTVKEICSVVNGATQ
KEIGRAREFILKHLELELGQSVEMGTIHAVDYMRRFCSNLGMTNQEVKAAQEIVQKSEEL
DIRRSPISIAAAVIYIVTQLSNEKKALKDISLATRVAEGTIKNSYKDLYPHISRLIPSWF
AKEGDLKNLCKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttgttctgccgcgactgcaaccaactcacggaggtggtgttcgaccactcc
gccggagacaccatatgctcggaatgcgggctggtattggaggctcactccatcgacgag
acctcggagtggcgaaccttcgcgaacgagtccaacgaccacgacccggcccgagttggc
ggcccgatgaacccgcttctctccgacggcgggctctccaccgtcatatctaagcccaat
ggcacttcctctggtttcttgacctcctcgctcggcaagtggcagactcgtggctctaac
tccgataggcacctcatcgaggccttcaaggccattgccattatgtccgataggctggga
ctggttacaaccataaaggatcgggccagtgaaatatataagaaagtagaagatcaaaaa
cctcttagaggacgaaatcaagaagcaattgtggctgcttgcctctacattgcttgccga
caagaaaacaagcctcggactgtgaaagaaatttgttctgttgtcaacggggccacacag
aaagaaattggcagggcaagagagttcattctaaaacacctggagctagagctgggtcaa
tctgtggaaatgggaactatacatgctgtggactatatgagacgtttttgttccaatctt
ggaatgaccaatcaagaagtcaaggctgcccaagaaattgttcagaaatctgaagagctt
gacataaggaggagcccgatatcaattgcagcagctgttatatacattgtaactcaacta
tcaaatgagaaaaaggcactcaaagatatctcacttgctactagagtggctgaaggaaca
atcaagaattcttataaggatctttatcctcatatctcacggctaattcctagctggttt
gccaaggagggtgatctcaagaatctgtgcaagtcctaa
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integrated database retrieval system
