KEGG   Quercus lobata (valley oak): 115963623
Entry
115963623         CDS       T07350                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115963623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115963623
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115963623
 Complex B
    115963623
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 115963623
NCBI-ProteinID: XP_030938561
UniProt: A0A7N2MRC0
LinkDB
Position
10:41405674..41409462
AA seq 321 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAHGQPIDPRTIQTHFEEFYEDLFEELTKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
RRQLFGRYRRRHSRSRSRSRSPYRHRSYEERSHGGRGSSKRYDERDYYHESQSRRHRTTS
PGHRRGRSRSKSPGERRNRSPVREGSEERRAKIEQWNREREQQQENANKVKNDGENANMQ
NGDQYYSYQQQPPPQQEKYNY
NT seq 966 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcgtcgatatttgggacggagaaagacagagtgaactgcccattc
tacttcaagatcggagcgtgcagacacggcgaccggtgctcgaggctccacacgaagccc
agcgtaagcccgaccctcctcctctccaacatgtaccagcgccctgacatgatcacgcct
ggcgtcgacgctcatggccagcccatcgaccctcgcaccattcaaacccacttcgaggag
ttctatgaagatctctttgaggagctcaccaagtacggcgagattgaaagcctcaatatc
tgtgacaaccttgccgaccacatggtgggtaatgtctatgttcagttcagagaggaagaa
catgctgcaaatgcacttcgcaatctgactggaaggttttatgctggccgtcccatcatt
gttgatttttctccagtaacagactttcgtgaagccacttgtaggcagtacgaggagaac
acttgcaaccgtggtggatactgcaattttatgcacttgaaaaggatcagcagggagtta
aggcggcaattgtttgggaggtaccgacgaaggcacagccgcagtcgaagccgaagtcgg
agcccctacaggcatcgtagctatgaagagcgctctcatgggggacgtggttctagcaaa
aggtatgatgaaagggattattatcacgaaagtcagagcaggaggcacaggaccacaagc
cctggccataggagaggacgaagcagaagcaagagccctggggaaaggaggaaccgcagt
ccagttagggaaggcagtgaagagcggcgtgccaaaattgaacaatggaatagggaaaga
gaacaacagcaagaaaatgctaataaggtcaaaaatgatggagaaaatgctaatatgcag
aatggagatcagtactatagctaccagcagcagccacctccacagcaagaaaaatataat
tactga

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