Quercus lobata (valley oak): 115963681
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Entry
115963681 CDS
T07350
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115963681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115963681
03009 Ribosome biogenesis [BR:
qlo03009
]
115963681
04131 Membrane trafficking [BR:
qlo04131
]
115963681
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115963681
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115963681
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115963681
Membrane trafficking [BR:
qlo04131
]
SNARE
SNARE associated proteins
Others
115963681
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115963681
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115963681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
AAA_24
ResIII
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
115963681
NCBI-ProteinID:
XP_030938635
UniProt:
A0A7N2MNT3
LinkDB
All DBs
Position
10:complement(8750442..8755892)
Genome browser
AA seq
818 aa
AA seq
DB search
MADPSSSAPDHGQPSSSSADQKSNKKDYSTAILERKKSPNRLVVDEAVTDDNSVVSMHPN
TMEKLQFFRGDTVLLKGKKRRDTVCIVLADEQCEEPKIRMNKVVRSNLRVRLGDVISVHQ
CPDVKYGKRVHILPIDDTIEGVSGNLFDVYLKPYFLESYRPVRKGDLFLVRGGMRSVEFK
VIETDPGEYCVVAPDTEIFCEGDPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLR
HPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMG
ATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLERVSKDTHG
YVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQSALGTSNPSALR
ETVVEVPNVSWEDVGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT
LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
RGGSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYI
PLPDEASRHQIFKACLRKSPISKEVDLAALARYTQGFSGADITEICQRACKYAIRENIEK
DIERERRKRENPEAMEEDDIDEVPEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQS
RGFGSEFRFPDRTESAAAGASDPFSSATAAGDDDDLYS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaagctcttctgccccagatcatgggcagccctcttcttcctctgcggac
cagaaaagtaataagaaggattattccactgcaattctggaacgcaagaagtctcctaat
cgtcttgttgttgatgaagctgtaactgatgataactctgtggtttccatgcaccctaat
acaatggaaaagcttcagtttttccgtggggacactgttttacttaagggaaagaagcga
agagacacagtctgtattgttcttgctgatgaacaatgtgaagaaccaaaaatcagaatg
aacaaagttgttcgatcaaatcttagagttcgtcttggagatgttatatccgtccatcag
tgccctgatgtgaagtatgggaaacgagttcacatccttccgattgatgatacaattgag
ggtgttagcggcaacttgtttgatgtatatttgaagccatatttcttggaatcttaccga
cctgtgaggaagggtgacctttttctagtcaggggtggaatgagaagtgttgaattcaag
gtgattgagacagaccctggtgagtattgtgttgtcgcaccagatactgaaatcttctgt
gagggagaccctatcaaacgtgaggatgaggagagattgaatgaagtgggatatgatgat
gttggtggtgttaggaagcaaatggctcagatccgtgagctagtagaacttcctcttaga
cacccacagctcttcaaatcaattggtgtgaaacccccaaaaggtatcttgctttatggg
ccacctgggtctggaaaaactctgattgcaagagctgtagctaatgagacaggtgcattc
ttctttttgattaatggacctgaaataatgtcaaagctagctggtgagtctgaaagcaac
ttgagaaaggcatttgaggaagccgaaaagaatgccccgtctattatatttattgatgag
atagattcaattgctccaaagagggaaaagacgaatggtgaggtggagaggcgtattgtt
tcccaactcctgacattaatggatggtctcaagtcccgagcacatgtgattgtcatggga
gctaccaataggcctaatagtattgatcctgcattgaggagatttggaagatttgatcgt
gaaattgacattggtgtaccggatgaagttggaagattggaagttcttagaatccacaca
aagaatatgaaacttgcagatgatgttgatcttgaaagagtttcgaaagatacccatggt
tatgttggcgcagatcttgctgctctttgcacagaggctgctcttcagtgcattcgggag
aaaatggatgtcattgacttagaggatgaaactattgatgctgaggtgttaaattcgatg
gctgtgagtaatgaacacttccaatctgcattgggaacttcaaatccatcagcgctacgt
gaaacagttgtggaggttcctaatgtttcctgggaagatgtgggaggtttggacaatgtt
aaaagagagcttcaggagactgtccaatacccagtggagcatcctgagaagtttgagaaa
tttggcatgtcaccttctaaaggtgttctcttttatgggcctcctggctgtggtaaaaca
ctacttgcaaaagcaattgccaatgaatgccaggcaaatttcattagtgtcaaaggacct
gagttgctgacaatgtggtttggagaaagtgaggcaaatgtgcgtgagatatttgacaag
gctaggcagtcagctccatgtgtccttttctttgacgaactagactctattgcaactcag
cgtggtggctctgttggtgatgctggtggtgctgcagacagagtactaaaccaacttctg
acagaaatggatggtatgacagccaagaaaacagtgttcattattggggcaacaaacaga
ccagacattattgattcagctttgctcaggcctggacgtctggaccagttgatttatatc
ccgcttccagatgaggcttcccgtcatcagatatttaaagcatgtttgcggaaatcgccc
atctctaaggaggttgaccttgcagctcttgcacggtatactcaagggttcagtggtgca
gatatcactgaaatttgtcagcgtgcctgcaaatatgctattagggaaaatattgagaag
gatattgagagggagagaaggaagagagagaaccctgaagctatggaggaggatgacatt
gatgaggttcctgagataaaggcagcacactttgaagagtcgatgaaatatgcccgccga
agtgtcagtgatgcagacatcaggaaataccagctctttgctcagactttacaacaatca
cgtggtttcggatctgagttccggtttccagatcgaactgagagtgctgcagcaggagct
tcagacccattttcctctgccactgctgccggagatgatgatgatctgtacagctaa
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