KEGG   Quercus lobata (valley oak): 115963710
Entry
115963710         CDS       T07350                                 
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115963710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115963710
Spliceosome [BR:qlo03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    115963710
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Trypan_PARP SPESP1
Other DBs
NCBI-GeneID: 115963710
NCBI-ProteinID: XP_030938695
UniProt: A0A7N2MNK3
LinkDB
Position
10:complement(3200241..3205836)
AA seq 415 aa
MAPHDLRRPFKRAAISDQQRRRELSLQRQAQHRRDAQHQARCLASFLNPHSEPEPEPETT
PELEPEPEPSDSPKELDIRHASKLKGAEARKWFARQLMLPEWMIDVPDQLPQDWYVFARP
AGKRCFVVSSNGTTVSRLRNGSMLHHFPSALPSGARTKDSSGSAQSYSILDCIFHESDQT
YYVIDMVCWREYSLYDCTAEFRFFWLSSKLAETGACDPPSQYHRYRFSPVPVYNCDQAGL
SAAYTGAVPYVKDGLLFYNKHAHYQTGNTPLALVWKDENCSQYVIDTDSKGQVPSQQQVV
LELQDNGNLSTSDDPPVVFGCLDRAIIEQTESCSGNLLRFAVGDGGLNFVDGKLEKADLH
YLGKPNRARAFADSYSKVMFQYMARHSPLRIDDLLASISSLSDQENKPDDVEMVG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcaccacacgatctccgccgtccgttcaagcgagcagcgatctccgatcaacagagg
cgcagggaactctccctacagcgtcaagcacagcaccgccgcgacgcccaacaccaagct
cgctgcttagcctctttcctcaacccccactccgaacccgaacccgaacccgaaaccaca
cccgaactcgaacccgaacccgaaccctcagactcaccgaaagagctcgacattcgccac
gcctcgaaactgaaaggcgccgaagctcgtaaatggttcgcccgacaactcatgcttccc
gagtggatgatcgacgtccctgatcaactcccccaagactggtatgtgtttgcgaggcca
gcagggaagcgatgctttgtggtgtcgagcaatggaacgacagtgagtaggttgagaaat
ggttcgatgctgcaccattttccttctgcgttgcctagtggagctaggactaaagattcc
tcaggctctgctcagtcttattctatactcgactgcatttttcatgagtcggatcagact
tactatgtgatagacatggtgtgctggcgggagtactcactctatgactgcacggctgag
tttaggttcttttggttgagctccaagcttgcggagactggtgcatgtgacccaccttcg
cagtatcatagatacagatttagtccagttccggtgtacaattgtgaccaggctggtcta
tctgcagcttatactggtgcagtcccttacgtgaaggatggtttgttgttttataacaag
catgcccattatcagactggaaatacaccactagcattagtttggaaggatgagaattgt
agtcaatatgtcattgacacagatagcaaaggacaggttccaagccaacaacaggtagtt
ttggagctacaagataatgggaacttgtctacatcagatgatcctcctgtagtatttggc
tgcttggatcgggccattatagaacagacagagtcgtgttcagggaatcttctgcgattt
gctgttggtgatggaggattgaattttgtggatgggaagcttgagaaggcagatttgcat
tatcttggcaagcccaatcgagcacgtgcttttgcagatagttactccaaggttatgttc
cagtatatggctcggcattctcctctaagaattgatgatctgctagcatctattagctca
ttaagtgatcaagaaaacaaacctgatgatgtggagatggttggttga

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