Quercus lobata (valley oak): 115963891
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Entry
115963891 CDS
T07350
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115963891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115963891
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115963891
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF6525
Motif
Other DBs
NCBI-GeneID:
115963891
NCBI-ProteinID:
XP_030938975
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Position
10:complement(32742622..32792988)
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AA seq
828 aa
AA seq
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MAGYENDDIPMLLDTHAQFLDEHPDSRFQRFVSTRSASISIPTNSMDSHDSETNLVGYTG
PLRSERRTPFTQMSGPLYIGRKPESLFPVNQGVTGHKKVESVPEKFPSSRGKDRNDWLND
NYAAKNEHLLRSGQLGVCNDPYCTVCPTYDNFRAAQQKNSKASSVFDPKFRNVLYGDAKG
WARRTFSFLQQYIPGVMNPHTKVVQRWNKFFVISCLVAIFVDPLFFFLLYVLKDNKCIII
NWPMTTTIVVFRSMTDLVYLFHMLLQFRLAYVALESRVVGAGELVDHPKKIALNYICGYF
FIDLFVVLPLPQIIILLILPKSLGGANYAKNLLRAAVLVQYIPRLYRFLPLLAGQSPSGF
VFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRVACENSGLASCLSFIDCGVG
KISKHFSDDPNSTWNSWKDNVNASACLTEDGFSYGIYKTAVSLTMEHSIITKYIFSLFWG
FQVAAVDCGFWWVDNSRLCWLGLVAVRLWVLEVHSSQLGTTVTGGRIVGLWRSMQISTLA
GNQNPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMSH
RRLPEELRRQVRHAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLCKFVKKVRIFALMD
DPILDAICERLRQKIYIKGSRILYHGGLVEKMVFIVRGKAESKGEDGIVVPLSEGDVCGE
ELLTWCLEHSSISKDGRKIKIPGQRLLSNRTVTCLTNIEAFSLRAADLEEVTSLFARFLR
NPRVNGAIRYESPYWRSLAAIRIQVAWRYRKKRLNRADTAHSNNSSRV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctggttatgaaaatgatgatatacctatgcttttagacacacatgcacagttcttg
gatgaacatccggattctcgatttcagagatttgtatccacaaggagtgcatcgatttcc
attcctacgaactcaatggattcccatgatagtgaaactaaccttgtgggctatactggt
cccttacggagtgaaagaaggactccattcacacagatgagtggtccattatacattggc
cgtaaacccgaaagcctttttccggtaaatcaaggtgtaacaggtcataaaaaagtggaa
tctgtgccagaaaagtttccttcttccagaggaaaggatcggaatgattggctgaatgac
aactatgcagccaaaaatgaacatttactgaggtctgggcagttgggagtgtgcaatgat
ccttattgcacagtttgcccaacatatgacaatttcagagccgctcaacaaaagaactca
aaagcttcatctgtatttgatcctaagttccgtaatgttctctatggggatgctaaaggc
tgggctaggagaactttttcctttctccaacaatatattcctggagtcatgaaccctcat
actaaagttgtgcaacgatggaacaaattttttgtcatttcttgcttggtggcaattttt
gtggacccattatttttcttcttgctgtatgtactaaaggataacaagtgtataattatt
aactggcccatgaccactacaattgtggttttcagaagtatgactgatctggtatactta
tttcacatgcttcttcagtttaggttggcttatgtggccctagagtcgcgagtggttggt
gctggagagttggttgaccatccaaagaaaattgctcttaattacatttgtggatacttt
tttattgacttgtttgttgtattacctcttcctcaaatcataatattgttaattctacca
aaatctttgggaggagccaattatgccaaaaatcttttacgggcagctgttcttgttcag
tacattcctagattgtataggtttctacctctacttgctggtcagtctccaagtggcttc
gtatttgagtcagcctgggctaatttcattataaatcttctcattttcatgttgtccggc
catgttgttgggtcatgttggtatctgtttgggttgcagagggttaatcaatgtcttcga
gttgcctgtgaaaactctggacttgcgtcatgtctgagttttatagattgtggggttgga
aaaatttctaaacatttttccgatgatcccaattcaacatggaatagctggaaagataat
gtgaatgccagtgcttgtttaactgaagatggcttttcgtatgggatttacaagacagct
gtctctcttactatggaacatagcatcataaccaaatatatattttcattattttgggga
ttccaggtagcagcagttgattgtgggttctggtgggttgacaatagtcgactatgctgg
ttagggttagtggcagtcagattgtgggttttggaggtccacagtagtcaactaggcacg
acggttaccggtggtcggattgtgggtttatggaggtccatgcaaatcagtaccctcgct
ggaaatcaaaatccaagctattttgtttgggaagtcctttttaccatggccattattgga
ctgggcctcttgctctttgctcttctcattggaaatatgcaaaactttcttcaggctctt
gggcggaggaggttagaaatgtctttaagacgtcgtgatgttgagcaatggatgagccat
cgacgcttgccagaagaactaagaaggcaagtacggcatgctgaacggtataattgggct
gctactagaggtgtaaatgaagaaatgcttttggagaatttgcccgaagaccttcagaga
gatataagacgccatctctgcaaatttgttaagaaagttcggatatttgccctgatggat
gatcctatcctagatgccatttgtgagagactaagacaaaagatatacatcaaaggaagc
agaattttgtatcatggtggcctggttgagaagatggttttcattgtacgcggaaaagca
gagagcaaaggagaagatggtattgtagttcccttgtctgaaggggatgtttgtggtgag
gaacttctaacatggtgtcttgagcattcttcaataagcaaagacggaagaaaaataaag
attcctggacagagattgcttagcaataggacggtaacgtgcttaacaaatattgaagca
ttttcactccgagctgcagaccttgaggaagtcaccagtctttttgcaagattcttgcgg
aatccacgtgttaatggggccataaggtatgaatcaccctactggagatcccttgcagca
atccgcattcaggtagcatggagatacagaaagaaacgtctaaatcgtgcagatactgct
cattctaataattcatcaagagtttga
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