Quercus lobata (valley oak): 115963892
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Entry
115963892 CDS
T07350
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115963892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115963892
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115963892
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Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115963892
NCBI-ProteinID:
XP_030938979
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Position
10:complement(32827010..32871413)
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AA seq
774 aa
AA seq
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MAGFEKDDIPMLSDTHAQFFDEHPDSRFQRFASTTRGSSISIPMNSLDSYDSETNLVGYT
GPLRSERRTPFTQMSGPLYVSRKPESLFPVNQGVTGQKKAEPVPEKFTSSRGKDQNDWPN
DNYATKNEHLLRSGQLGVCNDPYCTVCPTYDNFRATQQKNSIASSVFDHKFHNVLYGDAK
GWARRSFSFLQQYIPGVMNPHTKVVQRWNKFFVSSCLVAVFVDPLFFFLLYVLKDNKCII
INWPMTTTIVVFRSMTDLIYFFHMLLQFRLAYVAPESRVVGAGELVDHPKKIALNYIRGC
FFIDLFVVLPLPQIIILLVLPKSLGGANHAKNLLRAAVLVQYTPRLYRFLPLLAGQSPSG
FVFESAWANFIINLLTFMLSGHVVGSCWYLFGLQRVNQCLRLACHNSGLDACVSFIDCGN
GKHPEHFPNTSTWNSWKGNDNATACFTEDGFHYGIYLSAVNLTTEHSIVTRYIFSLFWGF
QQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRD
VEQWMSHRRLPEELRRQVRQAERYNWAATRGVNEEILLENLPEDLQRDIRRHLCKFVKKV
RIFALMDDPVLDAICERLRQKIYIKGSKILYHGGLVEKMVFFVRGKAESKGEDGIVVPLS
EGDVCGEELLTWCLEHSSVSKDGRKIRIFGQRLLSNRTVTCLTNVEAFSLRAADIEEVTS
LFARFLRKPRVQGAIRYESPYWRSLAASRIQVAWRYRKKRLNRADTSQSNNSSR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctggttttgaaaaagatgatatacctatgctttcagacacacatgcgcaattcttt
gatgaacatccggattctcgatttcagagatttgcatccacaacaaggggttcgtcaatt
tctattcctatgaactcactggattcctatgatagtgaaactaaccttgtgggctatact
ggtcccttacggagtgaaagaaggactccattcacacagatgagtggtccattatatgtt
agccgtaaacctgaaagcctttttccggttaatcaaggtgtaactggacaaaaaaaagca
gaacctgtgccagaaaagtttacttcttccagaggaaaggatcagaatgactggccgaat
gacaactatgctaccaaaaatgaacatttactgaggtctggacagttaggagtgtgcaat
gatccttattgcacagtttgcccaacatatgacaatttcagagccactcaacaaaagaac
tcaatagcttcatctgtatttgatcataagttccataatgttctctatggggatgccaaa
ggctgggctaggagatctttttcctttctccaacaatatattcctggggtcatgaaccct
catactaaagttgtgcaacgatggaacaaattttttgtcagttcttgcttggtggcagtt
ttcgtagacccattatttttcttcttgctgtatgtactaaaggataacaagtgtataata
attaactggcccatgaccactacaattgtggttttcagaagtatgactgatctgatatac
ttctttcacatgcttcttcagtttaggttggcttatgtggccccagagtcgcgagtggtt
ggtgctggagagttagttgaccatccaaagaaaattgctcttaattacattcgtggatgc
ttttttattgacttgtttgttgtattacctcttcctcaaatcataatattgttagttcta
ccaaaatctttgggaggagcaaatcatgctaaaaatcttttacgggcagctgttcttgtt
cagtacactcctagattgtataggtttctacctctacttgctggtcagtctccaagtgga
tttgtatttgagtcagcatgggcaaatttcattataaatcttctcaccttcatgttgtct
ggccatgttgttgggtcatgctggtatctctttgggttgcagagggttaatcaatgtctt
cgacttgcctgtcataactctggactcgatgcgtgcgtgagtttcatagattgtgggaat
gggaaacatcctgaacattttcccaatacttcaacatggaatagctggaaaggcaatgac
aatgccactgcttgttttactgaagatggctttcattatggaatctacttgtcagctgtc
aatcttactacggaacatagcatcgtaaccagatatatattttcattattctggggattc
cagcaaatcagtacacttgctggaaatcaaactccaagctactttgtttgggaagtcctt
ttcaccatggccattattgggctgggcctcttgctctttgctcttctcattggaaatatg
caaaattttcttcaggctcttgggcggaggaggttagaaatgtctctgagacgtcgtgat
gttgagcaatggatgagccatcgacgcttgccagaagaactaagaaggcaagtacggcaa
gctgaacggtataattgggctgctactagaggagtaaatgaagaaatacttttggagaat
ttacctgaagacctacagagagatataagacgccatctctgcaaatttgtaaagaaagtt
cggatatttgccctgatggatgatcctgtcttagatgccatttgtgagagactaaggcaa
aagatatacattaaaggaagcaaaattttatatcatggtggtctggttgagaagatggtt
ttctttgtacgtggaaaagcagagagcaaaggagaagatggcattgtagttcccttatct
gaaggggatgtttgtggtgaggaacttctaacatggtgtcttgagcattcttcagtaagc
aaagatggaagaaaaataaggatttttggacagagattgcttagcaacaggacagtaaca
tgcttaacaaatgtagaagcattttcactccgggctgcagacattgaggaagtcaccagt
ctttttgcaagattcttgcggaaaccacgtgttcaaggggccataaggtatgaatcaccc
tattggagatcccttgcagcaagccgaattcaggtagcatggagatacagaaagaaacgt
ctaaatcgtgcagatacctctcaatctaataattcatcaagatag
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