Quercus lobata (valley oak): 115963998
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Entry
115963998 CDS
T07350
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115963998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115963998
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
115963998
Prokaryotic type
Archaeal type
TFE
115963998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_8
Cas12f1-like_TNB
HVO_2753_ZBP
CpXC
Zn_Ribbon_TF
Zn_ribbon_SprT
FYVE_2
TFIIE_alpha
HVO_0758
Motif
Other DBs
NCBI-GeneID:
115963998
NCBI-ProteinID:
XP_030939142
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All DBs
Position
10:22973132..22988389
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AA seq
357 aa
AA seq
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MHTHSYCCLDYAQIYDVVRYRLHRMKKKLKDELDNKNTVQEYICPNCGKRYTALDALRLI
SMEDEFFHCESCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDMLQNLEVQLKPLIDQ
LTRVKDLPVPEFGTLHAWEARASAAVRAANGDSGAIDPSKSSQGLGYGGTSLPFVGDTKV
EVDFSGTEGKGENIKSETETSSLKVLPPWMIKEGMNLTKEQRGEVKQELRMDGSSAAVEF
SDDKKATIENDDKKNIQDEYIKAYYAALLKKQQELDEAAKKEHELSNTHSLNGVSDTTSN
RQVGIKSKRDEDEGDDDVEWEEAPVAGNSNENYKVNDLNVQADASGDDEDDIDWEEG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcacactcactcctactgttgtctggattatgctcagatctatgatgtcgtcaggtac
agattgcaccgtatgaagaaaaaactgaaagatgaattggacaacaagaatacagttcag
gagtatatatgccccaactgtgggaaaaggtacactgcattggatgcattacggttgatt
tctatggaggatgaattttttcattgtgaaagttgtaatggagaacttgtggctgagagt
gacaagttagctgctcaagaaggaggagatggagatgacaatgcaagaaggcgaaggcgt
gaaaagttaaaggacatgcttcaaaacttggaggtacagcttaagccattaatagatcaa
ctcactagagtaaaagacttacctgttcctgaatttggcacgcttcatgcatgggaagct
cgagcaagtgctgctgtgcgtgcagcaaatggtgattccggtgctattgatccttccaaa
tcttcccagggattgggttatggtggaacgtcattgccttttgttggagacaccaaggtt
gaagttgacttttctgggactgaaggcaagggagagaatattaaatctgaaactgaaact
tcatctctgaaagttttgccaccatggatgatcaaggaaggaatgaacctcacaaaggaa
caacggggagaggtcaagcaggagttgaggatggatggcagttcagcagctgtagaattt
tcagatgacaaaaaggcaacaattgaaaatgatgataagaagaatatacaggatgagtat
atcaaagcatattacgctgctttactcaagaaacagcaagaattggacgaagctgctaag
aaagaacatgaattgtcaaatacacactccttgaacggtgtttctgacacgacttctaat
cgccaagttgggataaagtcaaaacgtgacgaggatgagggagatgatgatgtggaatgg
gaagaggctccagttgctggcaattcaaatgaaaattacaaagtgaatgacttgaatgtt
caagctgatgcttcaggagatgatgaggatgatatagactgggaggaaggttaa
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