Quercus lobata (valley oak): 115964021
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Entry
115964021 CDS
T07350
Name
(RefSeq) TBC1 domain family member 22B
KO
K20360
TBC1 domain family member 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115964021
Membrane trafficking [BR:
qlo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115964021
Retrieval pathways
115964021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF6730
Get2_like
Motif
Other DBs
NCBI-GeneID:
115964021
NCBI-ProteinID:
XP_030939165
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All DBs
Position
10:52565072..52578631
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AA seq
458 aa
AA seq
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MRNTNNNNNNSAEDQRKKESTLTSLDSRFNQTLRNVQGLLKGRSIPGKILLTRRSDPLDE
SSVQERTPEYERSLSYNEAGSSDHLAKAAEEEVQSTSKLNNNTNVIKLKTSTSEIENTSK
EVQKSAMGARATDSARVMKFTKALSGTTVILEKLRELAWSGIPDYIRPDVWRLLLGYAPP
NSDRKEGILRRKRLEYLDCVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPDVSFFQEPQ
VQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEYLEGGADNWSISDLSLENISN
LEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHMEEQGLEFLQFA
FRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVM
FLQHLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaccaacaacaacaacaataacagcgcagaagatcagaggaagaaagagagc
actctcacaagccttgattccagattcaaccagaccctcaggaatgttcaaggtttgctc
aaaggccgcagtattcctggtaaaatattactgactaggagatcagacccactagatgaa
tcaagcgtacaagaacggactccagagtatgaaaggagcctttcatacaatgaagctggc
tcaagtgatcacttggccaaggcagcggaggaagaagtccagagtactagcaagctaaat
aataacacaaatgtcattaagttaaaaacatcaacctcagagatcgaaaatacatccaaa
gaagttcagaagtctgccatgggtgcaagagctacagattcagcaagagttatgaagttc
acaaaggcactttctgggacaacagtcatattagagaagttgcgtgagttagcttggagt
ggaataccagattatattcgccctgatgtgtggaggcttctcttgggatatgcaccacct
aattcagatagaaaggagggaattttaagaaggaagcgccttgagtatcttgactgtgtt
tctcagtattatgacattccagatacagaaagatcagatgacgagatcaatatgcttcgc
cagattgctgttgattgtccacgcactgtacctgatgtctctttcttccaagaaccacaa
gttcagaaatccttggagcgcatcctttatacatgggccattcggcatcctgcaagtgga
tatgttcagggaataaatgatctggctacaccctttctagttgttttcttgtcagaatac
ttagaagggggtgcggataactggtcaatctctgatttatctctggaaaatatctctaac
ttagaggctgattgctactggtgtctatcgaagttgcttgatggtatgcaagaccattac
acttttgctcaaccgggaattcagaggcttgtgtttaagttgaaggaattggtcaggcgg
attgatgaacctgtttcaagacacatggaggagcaagggctggaatttcttcaatttgct
ttccgctggttcaactgtcttctaatacgcgagatacctttccatcttgttacacgcctg
tgggacacatatcttgcggaaggggatgcgttgccagatttccttgtgtacatatttgcc
agttttcttttaacgtggtcagataagcttcagaagcttgatttccaagaattggtgatg
ttccttcaacatcttccgactcaaaactggactcaccaagagcttgagatggtgctttca
agagcattcatgtggcacagtatgtttaacaactctcccagccacttggctagctaa
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