Quercus lobata (valley oak): 115964083
Help
Entry
115964083 CDS
T07350
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115964083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115964083
03036 Chromosome and associated proteins [BR:
qlo03036
]
115964083
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115964083
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115964083
PBAF complex
115964083
GBAF(ncBAF) complex
115964083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115964083
NCBI-ProteinID:
XP_030939256
UniProt:
A0A7N2RBK4
LinkDB
All DBs
Position
10:complement(3757968..3761563)
Genome browser
AA seq
541 aa
AA seq
DB search
MAMNNSNNPTKNVGGPIPFGNSGTVSQPPHLLSQSQPQTQGGPHFPGHFQLSEPQSQAFA
YAQAQVQAQAVQAQFQAQLQAQAQVQAQTVAQLHAGNTSNVGVSSPPVVTPVTGSAKRSS
QKPPSRPPGSSNANTGSPYKTMELTPAARRKKRKQPEKQIPDKVAALLPESALYTQMLEL
ETRVDAALARKKTDIQESLKSPPRVQKTLRIYVFNTFTNQIQTSPDSTNAEPPSWSLKMI
GRILEDGRDPVVAGMMQRPSSSYPKFSAFFKKITIYLDQNLYPDNHVILWESARSPALHE
GFEVKRKGDKEFNAIIRLEMNYAPEKFKLSQALTEILGIEVDTRPRIIAAIWHYVKAKKL
QSPNDPSFFTCDPPLQKVFGEEKMKFSMVTQKISVHLTPPQPIHLEHKIKLSGNSPAGNT
CYDVLVDVPFQLEKEMSAFLANIERHKEIDACDELICASIKKIHEHRRRRAFFLGFSQSP
AEFINALIASQSKDLKLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSAASDAPGS
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaataatagtaataatccaactaagaatgttggggggccaatcccttttggt
aattctgggaccgtttcacagcccccacatcttctctctcagtcacaaccacaaacacaa
ggtgggcctcactttccaggccactttcagttgtctgagcctcaaagtcaggcgtttgct
tatgcgcaagcacaagtgcaagctcaggctgtgcaggctcaatttcaagcccagttacaa
gctcaagcacaagttcaggctcaaactgttgcccagttacatgctgggaatactagtaat
gtaggtgtgtcatctcctcctgttgtgacccctgttactgggagtgccaagaggagttcc
caaaagccgccttctaggcctccaggttcatccaatgccaacacggggtcaccgtataag
actatggagttgacaccagctgctcgtagaaagaagcggaagcaacctgagaagcaaata
ccagataaagtggctgcacttctgccggagtctgctctttacactcaaatgcttgaattg
gagactcgggttgatgctgctttggcaagaaagaagactgacattcaggagtctcttaaa
agccctccccgtgttcagaaaacactccggatttatgtcttcaacaccttcacaaatcag
atacaaacaagtcctgatagcacgaatgcagaacccccttcttggtctcttaagatgatt
gggaggatattggaagatggaagggatcctgtggtggctggaatgatgcagagaccaagc
tcttcttacccaaagttttcagcatttttcaagaaaattaccatatacttggaccagaac
ctctatccagataaccatgtaatcttatgggagagtgctcgctcacctgctcttcatgag
ggatttgaggtgaagagaaagggggataaggaattcaatgcgataataagactggaaatg
aattatgcaccagagaaattcaaactttcacaggctctgactgaaattcttggaattgag
gtagatacccgcccaaggattatcgcagcaatttggcactatgtgaaggctaagaagttg
caaagtcctaatgacccttccttctttacatgtgatccacctcttcagaaagtgtttggg
gaagagaaaatgaaattttccatggtaacacagaagatatcagtgcatttgacgcctcca
cagcctatacatttggagcataaaatcaagctttcaggaaattcccctgctggcaatact
tgttatgatgtgctggttgatgtgccttttcaattggaaaaggaaatgtctgccttcttg
gcaaacatcgaaaggcacaaagagattgatgcctgtgatgaattgatttgtgcttctata
aagaagatccatgagcatcgtaggaggcgggctttctttcttgggtttagccagtctcca
gcagaatttattaatgccttgattgcttctcagagcaaggatctaaagcttgttgctgga
gatgctagccgtaatgcagaaaaagagcgccgatctgatttctataatcaaccatgggtt
gaagatgctgttattcgttacctgaaccgcaaatctgctgctagtgatgctcctggtagc
acttga
DBGET
integrated database retrieval system
