Quercus lobata (valley oak): 115964334
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Entry
115964334 CDS
T07350
Name
(RefSeq) transcription factor MYB98-like
KO
K09422
transcription factor MYB, plant
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115964334
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
115964334
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SLIDE
DUF6581
Motif
Other DBs
NCBI-GeneID:
115964334
NCBI-ProteinID:
XP_030939528
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Position
10:complement(11090303..11092454)
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AA seq
475 aa
AA seq
DB search
MFDHSSSLPLSLMELDTKFRENLASQPMLLSDNYLKSYMKDDFSFEAPSSKGFLQDFHHL
DQFQTIGSSSNPIFGVQTQCYDTLNNNLAYGCTSTDFDIYECKPFMDNGGHGHVMDNFES
GGYLNLPQRNPIDIMGSDRSHVIFTSQDIIKPLNFVVPDEVSCITAENGYYKKIGMNKNR
ALPTTKKPQKGRKKSNVVKGQWTVEEDRILIQLVKQYGVRKWSYIAQMLPGRIGKQCRER
WHNHLRPDIKKDTWSEEEDKVLIQAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQY
SKRKCRSKYPRGSLLQEYIKGLNLDPSNMVQNRRKTSSSNATANNTTIKTPTQLPQSTDQ
FSPNARLVPNYDFNEVPDFCFDENMFQESCSIDSLLDDIPNNAPIMDENNFDDQMPCGPV
VNENMLHCPPVVVDENDFDMDIPVDMTPVVDCDVKKELDLVEMMSQVNEAKCVSP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccactcctcatctctccctctctctctaatggagcttgacacaaaatttagg
gaaaatcttgcttcacaaccaatgcttttgtctgataattacttaaagtcctatatgaaa
gatgatttctcctttgaagctccttcatcaaagggtttcttgcaagattttcaccatctt
gatcagtttcaaactattgggtcttcatcaaatcccatctttggggtgcaaactcagtgt
tatgatacattgaataacaatttggcatatgggtgcacctcaactgattttgatatttac
gagtgtaagccatttatggataatggtgggcatggtcatgttatggacaatttcgagagt
ggaggatacttgaatctccctcagagaaatcccattgatattatgggatcagatcggagt
catgtgatctttactagccaagacataataaaacctctgaattttgttgtaccagatgaa
gtctcatgcataacagcggaaaatgggtactacaaaaaaattggcatgaacaaaaataga
gcattgccaacaactaaaaaaccacaaaaaggtcgtaagaaatctaatgttgttaagggt
caatggacagttgaagaagacaggattttgattcaactggttaagcaatatggagtgaga
aaatggtcttatattgctcaaatgttgcctgggaggataggaaagcagtgccgagagaga
tggcataaccatcttagaccagacatcaagaaggatacatggagtgaagaggaagataag
gtactaattcaggcccatgcagagattggaaataaatgggcagagattgcaaagaggttg
cctgggagaactgaaaactccatcaagaaccattggaatgcaaccaaaagaaggcaatac
tcgaaacgaaaatgtcgttcaaagtaccctagaggctctcttttacaagaatacatcaag
ggcttgaacttggacccatcaaacatggtgcaaaacagaagaaaaacttcttctagtaat
gccacagccaataacaccaccattaaaacaccaactcagctgccacagtccactgaccag
ttttcccctaatgctcggttggttccaaactatgatttcaatgaggttccggacttttgt
ttcgacgaaaacatgtttcaggagagctgtagtatcgattctcttcttgatgacatacct
aacaatgctcctattatggatgagaacaattttgatgatcaaatgccttgtggtcctgtg
gttaatgagaatatgctgcattgtcctccagtagttgtggatgagaatgactttgacatg
gatattccagttgatatgactccagtggtagattgtgatgtgaagaaggagctggatttg
gtggagatgatgtctcaagttaatgaagccaaatgtgtaagcccttag
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