Quercus lobata (valley oak): 115964517
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Entry
115964517 CDS
T07350
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115964517
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115964517
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
115964517
NCBI-ProteinID:
XP_030939673
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Position
10:22275253..22276011
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AA seq
252 aa
AA seq
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MTETKVLRFRLSKPETETTPMAMGMTFLDHQYSKVPIINDSKVGVFGKDSGVPSRKRLII
KFRISNTKALKNNHQDSKPINKSSGYRERVRKLLTESFSRVSSETDERISPSIDPVQVAA
TVESVMFERIGWSNPIKKTKYQSILFNLKDPKNPDLRRKVLLGEIKPESLVTMSAEEMAS
HKRQSENIQIQLKRLKRCVHDADEEEKATTDMFQCSRCRERKCTYYQMQTRSADEPMTTY
VTCVKCNKRWKV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacagagacaaaggttttaaggtttcggctttccaagccagaaacagaaaccacacca
atggctatgggtatgacttttcttgatcatcaatattccaaggtacccatcatcaatgac
agtaaagttggtgtctttggaaaagattctggggttccaagcagaaagaggctgataatc
aagtttcgtatttctaatactaaggctttgaagaacaatcatcaagattccaagcccatc
aacaaaagctctggttatcgtgagagggttaggaaactgctgacagaatctttttccaga
gtttcttctgaaactgacgagagaatatcaccatcaatagacccagttcaagtggctgct
acagtagagtctgttatgtttgaaaggattgggtggtctaatcccatcaagaagacaaag
tatcagtcaatattgttcaatctgaaggacccaaagaacccagatttgaggagaaaggtg
cttcttggagagatcaagccggagagtcttgtaaccatgagtgccgaggagatggccagt
cacaagaggcagagtgagaacattcagatacagttgaaaaggttgaaaagatgtgtgcat
gatgctgatgaggaagaaaaggccaccactgacatgttccagtgtagccggtgtcgcgag
cgcaagtgtacttattatcaaatgcagacccggagtgccgatgaacccatgacaacatat
gtaacttgtgtcaaatgcaacaaacgctggaaggtctaa
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