Quercus lobata (valley oak): 115964858
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Entry
115964858 CDS
T07350
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115964858
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115964858
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Motif
Pfam:
Pectate_lyase_4
DUF3149
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115964858
NCBI-ProteinID:
XP_030939952
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Position
10:complement(47379302..47381121)
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AA seq
431 aa
AA seq
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MAPFNFFNKKWQAVSLLSLITILFTLLIPTLIASSPVKDPEFVVKEVQRSINASLTRRNL
KGDSSCSTGNPIDDCWKCDSNWDKNRQKLADCAVGFGKNAAGGKDGKIYVVTDSSDNDAV
NPKNGTLRHAVIQDEPLWIIFESDMVIKLKVELIMNSYKTIDGRGANVHITGGGCITIQD
ITNIIIHGINIHECKPSGNTNVRSSPGHFGHRGVSDGDAMSIFGSKHVWVDHVTLSNCDD
GLVDVVEASSLVTISNSLFTQHDKAILLGHADDYTADKSMKVTIAFNHFGEGLTQRLPRI
RHGYVHVVNNYYTKWKMYAIGGSASPTILSQGNKFVAPDDEKSKEVTKYENAPKSEWHKW
NWKSEGDEFLNGAFFTASSGIISSSNATFFTSYSESSSSSSASDITAKASSLVPKLTANA
GALKCKKGSAC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctcctttcaatttctttaataagaaatggcaagctgtaagcttgctctctctcatt
accattctcttcactctcctaatcccaacccttattgcctctagcccagttaaagacccg
gaatttgtagtaaaagaagtacaaaggagcatcaatgcctctttgacaaggagaaatttg
aagggagattcctcttgctcaactgggaacccaattgatgattgttggaagtgtgactcc
aattgggataagaatcggcagaagctagctgattgtgcagttgggtttggcaagaatgct
gctggtggaaaagatggtaagatttatgtggttacagattccagtgataatgatgctgta
aatcccaagaacgggactctaagacatgctgtgatccaagatgaaccattgtggattata
tttgaaagtgatatggtgatcaaattgaaggtggaattgattatgaactcgtataagacc
attgatggtaggggagctaatgtgcacataactggtggtggatgcattactattcaggac
ataactaacattataattcatgggataaacatacatgaatgtaagccatcagggaatact
aatgtgagaagttccccaggtcactttgggcataggggtgtttcagatggtgatgctatg
agcatctttggtagtaaacatgtttgggtggaccatgtcacactttcgaactgtgatgac
ggtctggttgatgttgttgaagcttcatccttggttaccatttcaaatagtttatttaca
caacatgataaggctattttattgggacacgctgatgactacactgcagacaagagcatg
aaagtcactattgccttcaatcactttggagaagggcttactcaaagacttccaaggatt
aggcacgggtacgtccatgtggtgaacaattactacaccaagtggaaaatgtatgccatt
ggtgggagtgcttcccctaccatccttagccaagggaacaaatttgttgctccagatgat
gaaaaaagcaaagaggtgaccaaatacgaaaatgcaccaaaaagtgaatggcataaatgg
aattggaaatctgaaggagatgaatttctaaatggtgcatttttcacagcctcctctgga
attatttcttcctcaaatgctacatttttcacatcctactctgaatctagttcttcctca
agcgcttccgacataactgcaaaagcatcttctcttgttcccaaacttacagctaatgcg
ggtgcacttaaatgcaagaagggttctgcatgctga
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