Quercus lobata (valley oak): 115965528
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Entry
115965528 CDS
T07350
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115965528
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115965528
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115965528
NCBI-ProteinID:
XP_030940635
UniProt:
A0A7N2RBF4
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Position
10:5711460..5713550
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AA seq
407 aa
AA seq
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MASSSSLSFITILFSFLIPSLIASTPAHDPELVVQEVQRSINASMTRRKLGYFSCSTGNP
IDDCWRCDSNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSSDDDAVNPKPGTLRYAV
IQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINI
HDCKQGGNAMVRDSPNHFGWRTISDGDGVSIFGGTHVWVDHVSLSNCADGLIDAIHGSSM
ITISNNFMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSASPTINSQGNRFLAPDNRNSKEVTKHEDAPQSEWKGWNWRSEGDLLLN
GAFFTPSGAGASSSYAKASSLGAKPSSLVATLTANAGTLSCRKGSKC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcttcttcactctctttcatcaccattctcttctctttcttaatcccaagc
ctcattgcctcaaccccagctcatgacccagagctcgtggtacaagaagtacaaaggagc
atcaatgcatctatgactaggagaaagttggggtatttctcatgctcaactgggaaccca
attgatgattgctggaggtgtgactccaattgggaaaaaaataggcagaggctggctgat
tgtgcaattgggtttggcaagaatgctgttggtggaagagatggaaagatttatgtggtc
acagattctagtgatgatgatgccgtaaatccgaagccagggactctaagatatgctgtg
atccaagatgaaccattgtggattatttttgcacgtgatatggtgatcagattgaaggag
gaattgattatgaactcgtttaagacaattgatggtaggggagctagtgtgcacatagct
ggtggtccgtgcattactattcagtatgtgactaacattataatccatgggataaacata
catgattgtaagcaaggagggaatgccatggtgagagattccccaaatcactttgggtgg
aggaccatatcagatggtgatggtgtttccatctttggtggtacccatgtttgggtggac
catgtctcattgtcaaactgtgctgatggtttgattgatgcaattcatgggtcttccatg
attaccatttcaaacaatttcatgacacaccatgataaggttatgttattgggacatagt
gattcctacactcaagacaagggcatgcaggtcactattgccttcaatcactttggagaa
gggcttgttcaaagaatgccaaggtgtaggcatgggtacttccatgtggtgaacaatgac
tacacccattgggaaatgtatgccattggtgggagtgcttcccccaccatcaatagccaa
gggaacagatttcttgcaccagataatagaaacagcaaagaggtgaccaaacatgaggat
gcaccacaaagtgaatggaagggctggaattggagatctgaaggagacctattgctaaat
ggtgcatttttcacaccatctggagctggggcttcctcgagctatgctaaggcttcgagc
ttaggtgcaaaaccatcttctcttgttgctactcttaccgctaatgctggtacacttagt
tgccggaagggttctaaatgctga
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