KEGG   Quercus lobata (valley oak): 115965769
Entry
115965769         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115965769
  09124 Replication and repair
   03420 Nucleotide excision repair
    115965769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115965769
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115965769
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115965769
  RNA polymerase III system
   RNA polymerase III
     115965769
  RNA polymerase I system
   RNA polymerase I
     115965769
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115965769
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 115965769
NCBI-ProteinID: XP_030940927
LinkDB
Position
10:52595075..52601240
AA seq 145 aa
MVEFLFEDIFRIERLNPDGKKFDKVIRVEAKSEKFDMFMHLDVMVTKDFEVKEGDKFAMV
IAPTLNLDGTPDTGYYTPGSRQSLADRFDYVMYGKLYKIADGSGRGIKAEINVSFGGLLM
MLRGDPSHCNKFELDQRLYVLMRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggtggagtttctttttgaagacattttcagaatcgagcgactaaacccagatggtaaa
aagtttgataaagttattcgggttgaagcaaaaagtgagaagtttgacatgttcatgcac
ctagatgtgatggttacaaaggattttgaagtgaaggaaggtgataagtttgctatggta
atagctccaacactaaatctggatggaacacctgacactggctattatactccgggcagt
cggcagtcacttgcagatagatttgattacgtcatgtatgggaaactgtataaaatcgca
gatggttcaggacgtggaattaaagcggagataaacgtttcgtttggtgggcttctgatg
atgctgaggggagatccatctcattgcaacaagtttgagcttgatcagaggctgtatgtc
cttatgaggaaggtgtga

DBGET integrated database retrieval system