Quercus lobata (valley oak): 115966328
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Entry
115966328 CDS
T07350
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115966328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
qlo04040
]
115966328
Ion channels [BR:
qlo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115966328
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115966328
NCBI-ProteinID:
XP_030941438
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Position
11:complement(6363158..6388061)
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AA seq
565 aa
AA seq
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MHLLLDPLFFYLPVAVINQNKLCTRVDGRLWKTTIVLRTFFDIIHLLHIILQFRTGFIDE
ELRKLAKPELNTDAWKIARKYLWPRFILDILTILPIPQVVVRIIISEMRSTESTHKVKFL
NAVVLFQYVPRVYQIYLSWRKLITNDKKFDRILRVKAPLNFILYILAGHVLGAFWYFFSI
QRLAACWQRKGGCDQNRIGCYGTSFYCDRSSGDLSFINDICRKYVLNTTSAFDFGIFLPA
LQSGVLESPDFPQKLFFSFWWGMRNLSSLGQNLQTSNYIWENCFALSISIFGLILFLYFL
GNLQMYMQWTTSKSKKKGDKIRMKMRSSQRQKQHKGMISWISQKKFDSTEKSLIMENINQ
RYEEGEDVNVENLVPDLPKDLQTKVKRHICLQILKNLKIMKDNGLDKRTQLLHKICDSLQ
LKFYNEHCYIVKEGDPIDALFLITNGIVWTYSSNNGEGSDSRHAERLEKGQHFGEKLLEW
VLKPTSDDMRNLSILPVSSKTLKTHTKVEAFALMAHDFKKIMESKFSLLGPEELQSKAAI
RVQRSWRQHRAKTYDDVVLDRAASL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctcttggatccattattcttttaccttcctgtggctgtgatcaatcaaaac
aagttgtgcactagggttgacggtagattgtggaaaacaactatcgttttgcgaactttc
tttgatatcattcacctactgcatattatattgcaatttcgcactggttttattgacgag
gaacttcggaaactggcaaaacctgagttaaatacagatgcttggaaaatagctcggaaa
tatttgtggcctcggttcatactcgacattctaactattcttcccatcccacaggtggta
gttcgaattattatttcagaaatgagaagtacagaatctacacataaagtaaaattcctg
aacgctgttgttctcttccaatatgtgccaagagtttatcaaatctacctatcctggagg
aaactaataacaaatgacaagaaatttgatagaatcttacgggtcaaagctccattgaat
ttcattctatacatccttgctggacatgtattgggagcgttttggtattttttctctatt
caacgactagcagcttgctggcagcggaagggagggtgtgatcaaaatcgtattggatgt
tatggaacttctttttactgtgatcgcagttctggagatctctcttttataaatgatatt
tgccgaaaatatgtcctaaatacaacgtcggcctttgactttggaatatttcttccagcc
cttcagtccggtgtcttagaatcgccagattttccacaaaaattatttttcagtttctgg
tggggcatgcgaaatctgagttctcttggtcaaaacctccaaacaagtaactatatatgg
gaaaattgctttgcactttctatttccatctttggcttgattctatttctatatttcttg
ggaaatttgcagatgtacatgcagtggacaacatcaaaatccaaaaaaaaaggggataag
atacgcatgaagatgaggtcaagtcaacgacaaaaacaacataagggcatgatatcatgg
atttcccaaaagaaatttgatagtacagaaaaaagcctgattatggaaaacataaatcag
agatatgaagaaggcgaagacgttaatgtggagaacctggtccccgatcttccaaaggat
cttcaaaccaaagttaagcgccatatctgcttacagatactaaagaatctaaaaatcatg
aaagataatggcttggataagcgtacgcaactgttgcataagatttgcgactctctccag
ttaaagttctacaatgagcattgctacattgtcaaggagggagaccctattgatgcatta
ttcttgattacaaatggcattgtatggacttattcaagcaataatggtgaaggatctgac
tctcgacatgctgagcgtcttgaaaaaggtcagcactttggagaaaaacttcttgaatgg
gttttgaaacctacctccgacgacatgcgcaacctatccatacttcctgtttcttcaaaa
accctcaaaacccacacaaaagtggaagccttcgctctaatggcccacgacttcaaaaaa
ataatggagtccaagttctcactattaggacccgaggaattgcaatccaaggctgcaatt
cgtgtacaacgaagttggcgccagcatcgtgcaaagacgtatgatgatgttgttctagac
agggcagcttctctttga
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