KEGG   Quercus lobata (valley oak): 115967422
Entry
115967422         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115967422
  09124 Replication and repair
   03420 Nucleotide excision repair
    115967422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115967422
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115967422
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115967422
  RNA polymerase III system
   RNA polymerase III
     115967422
  RNA polymerase I system
   RNA polymerase I
     115967422
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115967422
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat NMB0315_dom_I DUF2805 DUF7540
Other DBs
NCBI-GeneID: 115967422
NCBI-ProteinID: XP_030942371
UniProt: A0A7N2MUY3
LinkDB
Position
11:complement(9275191..9283656)
AA seq 204 aa
MSTPEQVSRIYKVRKTVFQMLRDRGYSVDDSEINMTRQQFTQHFGERIKRDELFIHKSKE
QDSSDQIYVFFPEGQVGAGVVKNLAQRLKADNIFSAIVVAQNRLTAQAKHGVEEVNKLIR
MEVFEEKELVVNITEHVLVPKHVVLSNDEKKEMLKKYGLKDLQLPQILVRDPVAKYYGLR
RGQVVKIIRESMTADEYETYRLAV
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcaacaccagaacaagtttcaaggatatataaagtccgaaaaacagtgtttcaaatg
ctgagggatcgtggttatagtgttgatgattctgagatcaacatgacaagacagcagttt
actcagcattttggtgaaagaattaaaagggatgaactttttatccataaaagcaaggaa
caagattcctccgatcagatttatgtcttctttcctgaggggcaagttggtgctggagta
gtaaagaatttggcccagcgtctgaaagctgataatattttcagtgcaattgtggttgct
caaaaccgtttgacagcacaagccaaacacggtgttgaagaagtcaataaacttatccgc
atggaggtctttgaggaaaaagaattagtggtcaatataacagaacatgttttagttcct
aaacatgtagtactatccaacgatgaaaagaaggagatgctgaagaagtatggattaaag
gatttacagctaccacagatattggtacgtgatccagttgctaagtattatgggcttaga
cgtgggcaagttgttaagatcatccgagaaagtatgactgctgatgaatatgaaacatat
agacttgctgtataa

DBGET integrated database retrieval system