Quercus lobata (valley oak): 115967499
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Entry
115967499 CDS
T07350
Name
(RefSeq) auxin response factor 19-like
KO
K14486
auxin response factor
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115967499
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
115967499
NCBI-ProteinID:
XP_030942465
UniProt:
A0A7N2RCW2
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Position
11:1819184..1827886
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AA seq
1125 aa
AA seq
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MKVPQNGFLPNSGEGEKKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQSR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELGARDLHDSSWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTITGISDLDTVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP
FYICPPPFFRPKFPRQPGMPDDDSDIENAFKRAMPWLGDEFGMKDAPSSIFPGLSLVQWM
SMQQNNQFSAAQSGLFPSMVSSNGLHNNLNADDPSKLLSFQAPAMSASNLQFNKANPQNQ
VSQLQQSPVAWPQQQHLQQLLQNPNSQQQQQRQMQHQELHQLSQQQQQQPQQQQRQLQQQ
QQQQQQQQQQICHPALVNNGVVAPNQIPNQSLQQPVAYSQLQQQQILTSNTQSQQSINSN
SKSSLHMTSLPLDSQFQQQIEPQPNLLQRHQQQAQLQQSPLPLLQQSLSQRAQQQPQMQQ
LSQQCLSEQQLQFQLLQKMQQQQQQQQQQQQQQHQHQHQQLLSPASSILQPQLLQQQQPN
QQNQQVQQIPLSQHQQQQHQQLSSTSFSTEKLLNGNSFSTSALMQSQQIPVNQPQSQHKP
LTAIRAHSGLTEGDAPSCSTSPSTNNCQVSPSNLLNRNQQGSAMLVGDSLIEPPSNLIQE
LQSKSDIRIKHELPSSKGPDQIKYKSTITDQLEASSSGTSYCLDASIPQNFPIPTFGLEG
DVQSHPRNNLPFATNIDGLAPDTLLSRGYDSQKDLQNLLSNYGGTPRDIETELSTAAISS
QSFGVPNIPFKPGCSSDVAINDAGVLSNGLWANQTQRMRTYTKVQKRGSVGRCIDVTRYK
EYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILS
SAEVQQMSLDGDLGHVPVLNQACSGTDSGNAWRPYEDNSAASFNR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccccaaaatgggtttcttccaaattctggagaaggagagaagaagagtatt
aattcagagttatggcatgcttgtgctggacctctggtttctttgcctccggttggaagt
ctcgtagtttacttccctcaaggccacagtgagcaagttgcagcatctatgcaaaaggag
actgatttcatacccaactacccgaaccttccttcaaagttgatttgcatgcttcataat
gtcaccctgcatgcggatcctgaaactgatgaggtctatgcacagatgacccttcaacct
gtaaacaaatatgacaaggaagctctactggcatctgacatgggcctcaagcaaagtaga
caacctactgaattcttctgcaaaactcttacagctagtgacactagtacgcatggtgga
ttttcagtacctcgtcgagcagctgagaagatctttccacctcttgattattcaatgcaa
cctccagctcaggagctaggagctagagatttgcatgacagttcgtggacatttcggcat
atttatcgcggccaaccaaaaaggcacctgttgactacgggttggagtgtctttgttagc
acaaaaaggctcttcgctggagattctgttctttttataagagatgaaaaatcccagctt
ctcttgggtataaggcgtgctaatagacagcagccagctctctcttcatcagtcatatct
agtgatagcatgcatattggaattcttgcagctgcagctcatgctgctgcaaataacagt
ccatttactatattttacaatccaagggctagcccgtctgagtttgtgattcccttagcc
aagtataacaaagcaatgtatactcaagtttctcttggcatgcgatttagaatgatgttt
gagactgaggagtcaggagtacggagatacatgggtacaattactggtatcagtgattta
gatactgtgcgatggaaaaattctcagtggcgtaaccttcaggttggatgggatgaatca
acagccggtgaacggccaagccgagtgtcaatctgggaaattgaacctgttgtaactcct
ttctacatatgtccacctccatttttcagacccaagtttccaaggcaaccagggatgcca
gatgatgattctgacatagagaatgctttcaagagagccatgccctggcttggagatgag
tttggcatgaaggatgcccctagctcaatctttcctggtttgagtttagtacagtggatg
agcatgcagcaaaataatcagttttcagctgctcaatctggacttttcccatcaatggtt
tcttcaaatggcttgcataataaccttaatgctgatgatccatctaaattattgagtttt
caagcccctgcaatgtctgcgtcaaatctccagtttaacaaagcaaatccacaaaaccag
gttagccagttgcaacagtcacctgttgcatggccccaacagcagcatctgcagcaatta
ttacagaatcctaatagccaacagcagcagcagcggcagatgcaacatcaagaactacat
cagctgtcccagcagcagcaacagcagccacaacagcaacaacgacaactgcagcaacaa
caacagcagcagcagcagcagcagcagcagatatgtcatccagctcttgtaaacaatggt
gtagttgcccctaaccagatcccaaatcaaagcttgcaacaaccagttgcatactctcag
cttcaacaacagcaaatactcacaagcaatacccaatcacagcagagtatcaactctaat
agtaaaagttcattgcacatgacatccctaccactagactcacagtttcaacaacaaatt
gaaccgcaaccaaatctcttacaaaggcaccagcagcaggcacagttacaacagtcccca
ctaccgttgttgcaacaaagcctgtcacagcgagcacagcagcagccacaaatgcaacag
ttgtcacaacaatgcctttcagagcagcagcttcaatttcaactgctacagaaaatgcaa
cagcaacagcaacagcaacagcagcagcagcagcaacagcatcagcatcagcatcagcaa
ttgctctccccagcaagctcaattttgcagcctcagctgctacagcaacagcagcccaat
cagcaaaaccagcaagtacaacagattcctttgtctcaacatcagcaacaacaacatcaa
cagctaagcagcactagcttctcaacagaaaagcttctcaatggtaatagcttctcaact
tctgcactgatgcaatcacaacagattcctgtgaaccagccccaaagccagcacaagcca
cttacagcaatcagagctcattctggtcttacagaaggagatgctccttcatgttcaacc
tcaccttccactaataattgccaggtttccccatccaaccttctgaatagaaaccaacag
ggatcagccatgttggtgggggattcattaatcgagcctccaagtaatctgattcaggag
ctgcagagcaagtccgatatacggattaaacatgagttgcccagctcaaaaggaccagac
cagataaaatataaaagtaccatcactgatcagttggaagcatcctcctcagggacatca
tattgtttggatgctagcatcccgcagaacttcccaatcccaacctttggtttagagggt
gatgttcaatcacatcctcggaacaatcttccttttgcaactaatattgatgggttggca
cctgacactttgttgtcaagggggtatgattctcaaaaagatcttcagaacttgctttct
aattatggcggtactccaagagatattgagacagagttatccactgctgcaatcagctct
cagtcatttggggtgccaaacatacctttcaagcccggatgttcaagtgatgttgctatc
aacgatgctggagttttgagcaacggattgtgggctaatcagactcaacgtatgcgaaca
tatacaaaggttcaaaagcgtggctctgtgggaagatgcattgatgttacccgttacaaa
gagtatgatgagctcaggcatgatcttgcccgcatgtttggaattgaagggcagctagaa
gatcctcaacggactgactggaaacttgtttatgtggatcatgaaaatgatattcttctt
gttggggatgacccatgggaggaatttgtaagctgtgttcagagcataaagatattgtcc
tctgctgaagtacagcagatgagcttggatggagatctgggtcatgttccagtgctcaac
caagcttgtagtgggactgacagtggtaatgcttggagaccatatgaggataattctgct
gcatcatttaatcgataa
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