Quercus lobata (valley oak): 115967562
Help
Entry
115967562 CDS
T07350
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115967562
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115967562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
PPR_1
Motif
Other DBs
NCBI-GeneID:
115967562
NCBI-ProteinID:
XP_030942541
UniProt:
A0A7N2MZ74
LinkDB
All DBs
Position
11:complement(38408661..38413405)
Genome browser
AA seq
837 aa
AA seq
DB search
MLVSRAQELSPCSSSTLTLTSSCNFLSTLCSSNPFLYFPMRSSLSFLRSLSLSLSHHQPH
HFHRHFFFRAISTPLSSSSPKPQKYFPLLAAASASSSHSTFVEHLACEPETNESWDFNNS
SESEAAFDFDKNDGSLDLKHLPALSLDVKELDELPEQWRRSKLAWLCKELPAHKAGTLVR
ILNAQRKWMRQADATYVAVHCMRIRENEAGFKVYKWMMQQHWYRFDFALATKLADYMGKE
RKFSKCREIFDDIINQGRVPCESTFHVLIVAYLSSSIQGCLEEACSIYNRMIQLGGYRPR
LSLHNSLFRALVSKPGASSKHYLKQAEFIFHNVVTSGLEIHKDIYGGLIWLHSYQDTIDK
KRIASLRKEMRDAGIEEGREVLVSILRACSKEGDVEDTEKAWLKLLHSEGGIPSQAFVYK
MEAYSKIGEPMKSLEIFREMQEQLGSTNVAAHHKIIEILCKAQEVELAESLMIEFINSNL
KPLTPSYIDMMSMYFNLSLHDKLELAFSQCLEKCRPNRTIYSIYLDSLVNVGNLDKAEEI
FNQMLSDGAINVHTRSCNTILRGYLSSGEYVKAEKIYDLMCQKKYDIDSPLMEKLDYVLS
LSRKEVKKPVSLKLSKEQREVLVGLLLGGLRIESDEERKNHMLRFELSENSSTHSVLKRH
IHDEYHEWLHPSCRQSEDSGDIPYRFSTISHSYFGFYADQFWPKGRPMIPKLIHRWLSPR
ALAYWYMYGGHRTSSGDILLKLKGNPEGAEKVVKALKAKSLDCRVKQRGRVFWIGFLGSN
SSWFWKLIEPYVLDDLKDVLKAGLAISENNLPETQDNSYDSGFESDEMLSNSSDGNL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgagcagagctcaagagctctcgccctgctcctcttccactctcactctcact
tcttcctgtaatttcctctcaacactctgctcctcaaacccatttctctacttccccatg
cgctcctctctttccttcctgcgctccctctctctctccctctctcaccaccaaccccac
cacttccaccgccactttttctttcgcgcaatttcaaccccactttcctcttcttctcca
aaaccccagaaatattttcctctccttgctgctgcatctgcctcttcttctcacagtact
ttcgtcgaacacttggcgtgcgaaccggaaaccaatgagagttgggattttaataacagt
agtgagagcgaggcagcttttgattttgataagaatgatgggtctttggatttgaagcat
ttgccggcgctgtctctggatgtgaaggagctggatgagctaccggagcagtggaggcgg
tcgaagctggcgtggctttgtaaggaactgccggcacataaggccggaacacttgttcgg
atactcaatgcgcaaaggaagtggatgaggcaagcagatgctacttatgttgccgtgcat
tgtatgcggattcgcgagaatgaggctgggtttaaggtatacaaatggatgatgcaacaa
cattggtatagatttgattttgctcttgctaccaagctagctgattacatgggtaaggag
cgaaaattctcaaaatgtcgtgagatattcgatgatataatcaaccagggacgtgtccct
tgtgaatctacattccatgtattaattgttgcctatcttagttcatccattcaaggatgt
ttggaggaagcatgtagcatttacaatcgtatgattcagttgggaggttaccggcctaga
cttagcttgcataattccctatttagagctcttgtaagcaagccaggagcctcttcaaag
cattatctaaaacaggctgagtttatttttcacaacgtggtaacaagtggactggagata
cataaggatatctacggtggtcttatttggctacacagctatcaggacaccattgataaa
aaaaggattgcatcattaaggaaggaaatgcgagatgcaggaattgaggagggtagagaa
gtgctcgtgtctatcttgagagcctgctcaaaggagggggatgtggaggatacagaaaaa
gcatggctcaaactgctccattctgaaggtggtatcccgtctcaggcttttgtgtataaa
atggaagcctattcaaagattggagaacctatgaaatctttggagatattcagagagatg
caggaacaattgggttccaccaatgttgcagcacatcataaaatcatagagattttatgt
aaagctcaagaagttgaacttgctgaatccctcatgatagaattcataaacagtaatttg
aagccactaacaccatcttatattgatatgatgagtatgtatttcaacttgagcctccat
gataagttggagttagccttctctcagtgccttgagaaatgtcgacctaaccgtaccatt
tacagtatatacttggattctttggtgaatgttggaaatcttgacaaagctgaggagatc
tttaatcaaatgctaagtgatggggcaatcaatgttcacactcgatcatgcaacaccatt
ttaaggggatacctatcttctggagaatatgtgaaggcagagaagatatatgatctgatg
tgccagaagaaatatgatattgattccccattgatggaaaagcttgattatgtcctgagt
ttgagcaggaaagaggttaagaaaccagtaagcttgaagctaagcaaagaacagcgagag
gttttagtgggtttgctgttaggtggtttgcggattgaatcagatgaagagaggaagaat
cacatgcttcgttttgaacttagtgagaattccagcacacattctgttttgaagagacat
atacatgacgagtaccatgagtggttacatccttcgtgtaggcaaagtgaagacagcggg
gatataccatatagattttctaccatctcgcactcttattttggtttctatgctgaccaa
ttttggccaaaaggcaggcccatgatcccaaagctaatccatcggtggctgtcgccacgt
gctcttgcatactggtatatgtatgggggccacagaacttcttcgggggatattttgtta
aagctgaagggaaatcctgagggtgccgagaaggttgtcaaagcattgaaggcaaaatcc
ttagactgcagggtaaagcagaggggaagagtgttttggattggttttctgggaagcaat
tcctcatggttctggaaattgattgaaccttatgttttagatgacttgaaagatgttcta
aaagctggtcttgcaatttcagaaaacaatttgccagagactcaagacaatagttatgat
agtgggtttgaatctgatgaaatgctctctaattccagtgatggcaatttgtag
DBGET
integrated database retrieval system
